RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 ROMO1P60602 79 aa3.91□□□□□ -1.78
CMTM3-209ENST00000565003 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
CMTM3-209ENST00000565003 A6NED7 52 aa3.87□□□□□ -1.79
CMTM3-209ENST00000565003 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
CMTM3-209ENST00000565003 CAMK2N1Q7Z7J9 78 aa3.86□□□□□ -1.79
CMTM3-209ENST00000565003 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
CMTM3-209ENST00000565003 COA5Q86WW8 74 aa3.83□□□□□ -1.8
CMTM3-209ENST00000565003 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
CMTM3-209ENST00000565003 A8MU10 97 aa3.79□□□□□ -1.8
CMTM3-209ENST00000565003 KRTAP19-7Q3SYF9 63 aa3.79□□□□□ -1.8
CMTM3-209ENST00000565003 A0A0D9SG42 100 aa3.78□□□□□ -1.8
CMTM3-209ENST00000565003 PRR15LQ9BU68 103 aa3.78□□□□□ -1.8
CMTM3-209ENST00000565003 MIR22HGQ0VDD5 57 aa3.77□□□□□ -1.81
CMTM3-209ENST00000565003 SPATA8Q6RVD6 105 aa3.76□□□□□ -1.81
CMTM3-209ENST00000565003 MT1EP04732 61 aa3.75□□□□□ -1.81
CMTM3-209ENST00000565003 LINC01558Q9Y6Z2 57 aa3.75□□□□□ -1.81
CMTM3-209ENST00000565003 A0A1B0GU33 70 aa3.72□□□□□ -1.81
CMTM3-209ENST00000565003 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
CMTM3-209ENST00000565003 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
CMTM3-209ENST00000565003 SPINT4Q6UDR6 99 aa3.71□□□□□ -1.82
CMTM3-209ENST00000565003 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
CMTM3-209ENST00000565003 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
CMTM3-209ENST00000565003 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
CMTM3-209ENST00000565003 A0A1B0GU69 56 aa3.62□□□□□ -1.83
CMTM3-209ENST00000565003 UQCR11O14957 56 aa3.62□□□□□ -1.83
CMTM3-209ENST00000565003 MT1GP13640 62 aa3.61□□□□□ -1.83
CMTM3-209ENST00000565003 MT1LQ93083 61 aa3.58□□□□□ -1.84
CMTM3-209ENST00000565003 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
CMTM3-209ENST00000565003 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
CMTM3-209ENST00000565003 MT1MQ8N339 61 aa3.57□□□□□ -1.84
CMTM3-209ENST00000565003 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
CMTM3-209ENST00000565003 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
CMTM3-209ENST00000565003 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
CMTM3-209ENST00000565003 TNP1P09430 55 aa3.53□□□□□ -1.84
CMTM3-209ENST00000565003 KRTAP15-1Q3LI76 137 aa3.52□□□□□ -1.85
CMTM3-209ENST00000565003 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
CMTM3-209ENST00000565003 MT4P47944 62 aa3.49□□□□□ -1.85
CMTM3-209ENST00000565003 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
CMTM3-209ENST00000565003 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
CMTM3-209ENST00000565003 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
CMTM3-209ENST00000565003 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
CMTM3-209ENST00000565003 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
CMTM3-209ENST00000565003 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
CMTM3-209ENST00000565003 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
CMTM3-209ENST00000565003 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
CMTM3-209ENST00000565003 INE1O15225 51 aa3.18□□□□□ -1.9
CMTM3-209ENST00000565003 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
CMTM3-209ENST00000565003 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
CMTM3-209ENST00000565003 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
CMTM3-209ENST00000565003 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
CMTM3-209ENST00000565003 MT1AP04731 61 aa3.03□□□□□ -1.92
CMTM3-209ENST00000565003 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
CMTM3-209ENST00000565003 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
CMTM3-209ENST00000565003 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
CMTM3-209ENST00000565003 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
CMTM3-209ENST00000565003 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
CMTM3-209ENST00000565003 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
CMTM3-209ENST00000565003 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
CMTM3-209ENST00000565003 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
CMTM3-209ENST00000565003 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
CMTM3-209ENST00000565003 MT3P25713 68 aa2.76□□□□□ -1.97
CMTM3-209ENST00000565003 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
CMTM3-209ENST00000565003 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
CMTM3-209ENST00000565003 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
CMTM3-209ENST00000565003 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
CMTM3-209ENST00000565003 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
CMTM3-209ENST00000565003 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
CMTM3-209ENST00000565003 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
CMTM3-209ENST00000565003 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
CMTM3-209ENST00000565003 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
CMTM3-209ENST00000565003 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
CMTM3-209ENST00000565003 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
CMTM3-209ENST00000565003 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
CMTM3-209ENST00000565003 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
CMTM3-209ENST00000565003 PRM1P04553 51 aa1.66□□□□□ -2.14
CMTM3-209ENST00000565003 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
CMTM3-209ENST00000565003 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 9.1 ms