RNA–Protein interactions for RNA: ENST00000564969.5

FANCA-217, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 850 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-217ENST00000564969 PP632Q6XCG6 107 aa4.31□□□□□ -1.72
FANCA-217ENST00000564969 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
FANCA-217ENST00000564969 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
FANCA-217ENST00000564969 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
FANCA-217ENST00000564969 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
FANCA-217ENST00000564969 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
FANCA-217ENST00000564969 KMT2DO14686 5537 aa4.22□□□□□ -1.73
FANCA-217ENST00000564969 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
FANCA-217ENST00000564969 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
FANCA-217ENST00000564969 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
FANCA-217ENST00000564969 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
FANCA-217ENST00000564969 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
FANCA-217ENST00000564969 SYNE2Q8WXH0 6885 aaKnown RBP4.17□□□□□ -1.74
FANCA-217ENST00000564969 MT1EP04732 61 aa4.15□□□□□ -1.75
FANCA-217ENST00000564969 SVIPQ8NHG7 77 aa4.12□□□□□ -1.75
FANCA-217ENST00000564969 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
FANCA-217ENST00000564969 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
FANCA-217ENST00000564969 MT1LQ93083 61 aa4.03□□□□□ -1.76
FANCA-217ENST00000564969 MT1GP13640 62 aa4.02□□□□□ -1.77
FANCA-217ENST00000564969 SPRR2EP22531 72 aa4.02□□□□□ -1.77
FANCA-217ENST00000564969 SPRR2BP35325 72 aa4.02□□□□□ -1.77
FANCA-217ENST00000564969 SPRR2AP35326 72 aa4.02□□□□□ -1.77
FANCA-217ENST00000564969 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
FANCA-217ENST00000564969 MDN1Q9NU22 5596 aa3.93□□□□□ -1.78
FANCA-217ENST00000564969 MT1MQ8N339 61 aa3.92□□□□□ -1.78
FANCA-217ENST00000564969 NEBP20929 6669 aa3.9□□□□□ -1.79
FANCA-217ENST00000564969 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
FANCA-217ENST00000564969 SPRR2DP22532 72 aa3.89□□□□□ -1.79
FANCA-217ENST00000564969 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
FANCA-217ENST00000564969 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
FANCA-217ENST00000564969 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
FANCA-217ENST00000564969 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
FANCA-217ENST00000564969 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
FANCA-217ENST00000564969 SPRR5A0A1B0GTR4 108 aa3.7□□□□□ -1.82
FANCA-217ENST00000564969 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
FANCA-217ENST00000564969 KRTAP2-1Q9BYU5 128 aa3.68□□□□□ -1.82
FANCA-217ENST00000564969 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
FANCA-217ENST00000564969 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
FANCA-217ENST00000564969 DSTQ03001 7570 aaKnown RBP3.62□□□□□ -1.83
FANCA-217ENST00000564969 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
FANCA-217ENST00000564969 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
FANCA-217ENST00000564969 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
FANCA-217ENST00000564969 MT1AP04731 61 aa3.45□□□□□ -1.86
FANCA-217ENST00000564969 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
FANCA-217ENST00000564969 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
FANCA-217ENST00000564969 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
FANCA-217ENST00000564969 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
FANCA-217ENST00000564969 MT4P47944 62 aa3.35□□□□□ -1.87
FANCA-217ENST00000564969 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
FANCA-217ENST00000564969 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
FANCA-217ENST00000564969 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
FANCA-217ENST00000564969 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
FANCA-217ENST00000564969 MT3P25713 68 aa3.16□□□□□ -1.9
FANCA-217ENST00000564969 KRTAP6-2Q3LI66 62 aa3.16□□□□□ -1.9
FANCA-217ENST00000564969 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
FANCA-217ENST00000564969 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
FANCA-217ENST00000564969 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
FANCA-217ENST00000564969 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
FANCA-217ENST00000564969 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
FANCA-217ENST00000564969 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
FANCA-217ENST00000564969 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
FANCA-217ENST00000564969 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
FANCA-217ENST00000564969 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
FANCA-217ENST00000564969 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
FANCA-217ENST00000564969 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
FANCA-217ENST00000564969 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
FANCA-217ENST00000564969 INE1O15225 51 aa2.73□□□□□ -1.97
FANCA-217ENST00000564969 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
FANCA-217ENST00000564969 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
FANCA-217ENST00000564969 MUC5ACP98088 5654 aa2.58□□□□□ -2
FANCA-217ENST00000564969 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
FANCA-217ENST00000564969 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
FANCA-217ENST00000564969 PRM1P04553 51 aa2.33□□□□□ -2.04
FANCA-217ENST00000564969 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
FANCA-217ENST00000564969 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
FANCA-217ENST00000564969 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.1
FANCA-217ENST00000564969 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
FANCA-217ENST00000564969 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms