RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 FCGBPQ9Y6R7 5405 aaPredicted RBP7.51□□□□□ -1.21
SPSB3-206ENST00000564709 KRTAP2-3P0C7H8 128 aa7.49□□□□□ -1.21
SPSB3-206ENST00000564709 KRTAP2-4Q9BYR9 128 aa7.49□□□□□ -1.21
SPSB3-206ENST00000564709 KRTAP2-1Q9BYU5 128 aa7.49□□□□□ -1.21
SPSB3-206ENST00000564709 KRTAP4-3Q9BYR4 195 aa7.45□□□□□ -1.22
SPSB3-206ENST00000564709 MUC12Q9UKN1 5478 aa7.4□□□□□ -1.22
SPSB3-206ENST00000564709 LOC100996750A0A140TA64 210 aa7.38□□□□□ -1.23
SPSB3-206ENST00000564709 CRCT1Q9UGL9 99 aa7.35□□□□□ -1.23
SPSB3-206ENST00000564709 MT1GP13640 62 aa7.3□□□□□ -1.24
SPSB3-206ENST00000564709 KRTAP19-3Q7Z4W3 81 aa7.3□□□□□ -1.24
SPSB3-206ENST00000564709 MT1MQ8N339 61 aa7.3□□□□□ -1.24
SPSB3-206ENST00000564709 SPRR2FQ96RM1 72 aa7.15□□□□□ -1.27
SPSB3-206ENST00000564709 MACF1Q9UPN3 7388 aaKnown RBP7.1□□□□□ -1.27
SPSB3-206ENST00000564709 LCE5AQ5TCM9 118 aa7.06□□□□□ -1.28
SPSB3-206ENST00000564709 DSTQ03001 7570 aaKnown RBP7.04□□□□□ -1.28
SPSB3-206ENST00000564709 KRTAP9-6A0A140TA67 174 aa6.96□□□□□ -1.3
SPSB3-206ENST00000564709 SYNE2Q8WXH0 6885 aaKnown RBP6.91□□□□□ -1.3
SPSB3-206ENST00000564709 KRTAP5-9P26371 169 aa6.83□□□□□ -1.32
SPSB3-206ENST00000564709 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.79□□□□□ -1.32
SPSB3-206ENST00000564709 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
SPSB3-206ENST00000564709 MDN1Q9NU22 5596 aa6.73□□□□□ -1.33
SPSB3-206ENST00000564709 KRTAP6-3Q3LI67 103 aa6.67□□□□□ -1.34
SPSB3-206ENST00000564709 LCE1AQ5T7P2 110 aa6.65□□□□□ -1.34
SPSB3-206ENST00000564709 KRTAP12-4P60329 112 aa6.64□□□□□ -1.35
SPSB3-206ENST00000564709 KRTAP6-1Q3LI64 71 aa6.63□□□□□ -1.35
SPSB3-206ENST00000564709 KRTAP4-9Q9BYQ8 210 aa6.6□□□□□ -1.35
SPSB3-206ENST00000564709 SPRR2EP22531 72 aa6.58□□□□□ -1.36
SPSB3-206ENST00000564709 SPRR2BP35325 72 aa6.58□□□□□ -1.36
SPSB3-206ENST00000564709 SPRR2AP35326 72 aa6.58□□□□□ -1.36
SPSB3-206ENST00000564709 MT1AP04731 61 aa6.51□□□□□ -1.37
SPSB3-206ENST00000564709 SYNE1Q8NF91 8797 aaKnown RBP6.48□□□□□ -1.37
SPSB3-206ENST00000564709 KRTAP5-5Q701N2 237 aaPredicted RBP6.44□□□□□ -1.38
SPSB3-206ENST00000564709 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
SPSB3-206ENST00000564709 SPRR2DP22532 72 aa6.33□□□□□ -1.4
SPSB3-206ENST00000564709 LCE3DQ9BYE3 92 aa6.25□□□□□ -1.41
SPSB3-206ENST00000564709 NEBP20929 6669 aa6.21□□□□□ -1.42
SPSB3-206ENST00000564709 LCE3EQ5T5B0 92 aa6.15□□□□□ -1.43
SPSB3-206ENST00000564709 KRTAP9-4Q9BYQ2 154 aa6.14□□□□□ -1.43
SPSB3-206ENST00000564709 KRTAP6-2Q3LI66 62 aa5.97□□□□□ -1.45
SPSB3-206ENST00000564709 PRM1P04553 51 aa5.88□□□□□ -1.47
SPSB3-206ENST00000564709 MT3P25713 68 aa5.85□□□□□ -1.47
SPSB3-206ENST00000564709 OBSCNQ5VST9 7968 aa5.82□□□□□ -1.48
SPSB3-206ENST00000564709 KRTAP5-4Q6L8H1 288 aa5.73□□□□□ -1.49
SPSB3-206ENST00000564709 KRTAP2-2Q9BYT5 123 aa5.7□□□□□ -1.5
SPSB3-206ENST00000564709 KRTAP20-1Q3LI63 56 aa5.68□□□□□ -1.5
SPSB3-206ENST00000564709 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
SPSB3-206ENST00000564709 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
SPSB3-206ENST00000564709 MT4P47944 62 aa5.54□□□□□ -1.52
SPSB3-206ENST00000564709 KRTAP20-2Q3LI61 65 aa5.39□□□□□ -1.55
SPSB3-206ENST00000564709 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
SPSB3-206ENST00000564709 KRTAP5-2Q701N4 177 aa5.31□□□□□ -1.56
SPSB3-206ENST00000564709 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
SPSB3-206ENST00000564709 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
SPSB3-206ENST00000564709 MUC5ACP98088 5654 aa4.95□□□□□ -1.62
SPSB3-206ENST00000564709 LCE1EQ5T753 118 aa4.83□□□□□ -1.64
SPSB3-206ENST00000564709 LCE1BQ5T7P3 118 aa4.81□□□□□ -1.64
SPSB3-206ENST00000564709 AHNAK2Q8IVF2 5795 aa4.64□□□□□ -1.67
SPSB3-206ENST00000564709 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
SPSB3-206ENST00000564709 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
SPSB3-206ENST00000564709 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
SPSB3-206ENST00000564709 GPR98Q8WXG9 6306 aa4.56□□□□□ -1.68
SPSB3-206ENST00000564709 KRTAP5-1Q6L8H4 278 aa4.55□□□□□ -1.68
SPSB3-206ENST00000564709 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
SPSB3-206ENST00000564709 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
SPSB3-206ENST00000564709 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
SPSB3-206ENST00000564709 KRTAP21-2Q3LI59 83 aa4.26□□□□□ -1.73
SPSB3-206ENST00000564709 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
SPSB3-206ENST00000564709 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
SPSB3-206ENST00000564709 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
SPSB3-206ENST00000564709 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
SPSB3-206ENST00000564709 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
SPSB3-206ENST00000564709 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
SPSB3-206ENST00000564709 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
SPSB3-206ENST00000564709 KRTAP21-1Q3LI58 79 aa3.64□□□□□ -1.83
SPSB3-206ENST00000564709 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
SPSB3-206ENST00000564709 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
SPSB3-206ENST00000564709 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
SPSB3-206ENST00000564709 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms