RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 UQCR11O14957 56 aa8.81□□□□□ -1
AC009041.3-201ENST00000564390 LCE1DQ5T752 114 aa8.77□□□□□ -1.01
AC009041.3-201ENST00000564390 GPR98Q8WXG9 6306 aa8.77□□□□□ -1.01
AC009041.3-201ENST00000564390 MT4P47944 62 aa8.69□□□□□ -1.02
AC009041.3-201ENST00000564390 LCE4AQ5TA78 99 aa8.69□□□□□ -1.02
AC009041.3-201ENST00000564390 KRTAP12-3P60328 96 aa8.68□□□□□ -1.02
AC009041.3-201ENST00000564390 MIR22HGQ0VDD5 57 aa8.63□□□□□ -1.03
AC009041.3-201ENST00000564390 KRTAP4-7Q9BYR0 210 aa8.62□□□□□ -1.03
AC009041.3-201ENST00000564390 HMCN1Q96RW7 5635 aa8.6□□□□□ -1.03
AC009041.3-201ENST00000564390 Q1T7F1 81 aa8.55□□□□□ -1.04
AC009041.3-201ENST00000564390 KRTAP5-4Q6L8H1 288 aa8.55□□□□□ -1.04
AC009041.3-201ENST00000564390 RPS28P62857 69 aaKnown RBP8.52□□□□□ -1.05
AC009041.3-201ENST00000564390 PSPHP1O15172 72 aa8.49□□□□□ -1.05
AC009041.3-201ENST00000564390 KRTAP25-1Q3LHN0 102 aa8.49□□□□□ -1.05
AC009041.3-201ENST00000564390 V9GYY9 64 aa8.48□□□□□ -1.05
AC009041.3-201ENST00000564390 K7ERS5 55 aa8.44□□□□□ -1.06
AC009041.3-201ENST00000564390 KRTAP4-6Q9BYQ5 205 aa8.42□□□□□ -1.06
AC009041.3-201ENST00000564390 AHNAK2Q8IVF2 5795 aa8.32□□□□□ -1.08
AC009041.3-201ENST00000564390 KRTAP5-5Q701N2 237 aaPredicted RBP8.22□□□□□ -1.09
AC009041.3-201ENST00000564390 A6NED7 52 aa8.17□□□□□ -1.1
AC009041.3-201ENST00000564390 LOC100996750A0A140TA64 210 aa8.16□□□□□ -1.1
AC009041.3-201ENST00000564390 KRTAP5-10Q6L8G5 202 aa8.13□□□□□ -1.11
AC009041.3-201ENST00000564390 KRTAP23-1A1A580 65 aa8.11□□□□□ -1.11
AC009041.3-201ENST00000564390 KRTAP20-2Q3LI61 65 aa8.1□□□□□ -1.11
AC009041.3-201ENST00000564390 KRTAP15-1Q3LI76 137 aa8.09□□□□□ -1.11
AC009041.3-201ENST00000564390 KRTAP19-4Q3LI73 84 aa8.04□□□□□ -1.12
AC009041.3-201ENST00000564390 SPRR5A0A1B0GTR4 108 aa8.01□□□□□ -1.13
AC009041.3-201ENST00000564390 CDC42SE1Q9NRR8 79 aa8.01□□□□□ -1.13
AC009041.3-201ENST00000564390 KRTAP12-4P60329 112 aa7.99□□□□□ -1.13
AC009041.3-201ENST00000564390 LCE3CQ5T5A8 94 aa7.98□□□□□ -1.13
AC009041.3-201ENST00000564390 KRTAP5-3Q6L8H2 238 aa7.95□□□□□ -1.14
AC009041.3-201ENST00000564390 ROMO1P60602 79 aa7.88□□□□□ -1.15
AC009041.3-201ENST00000564390 SYNE1Q8NF91 8797 aaKnown RBP7.86□□□□□ -1.15
AC009041.3-201ENST00000564390 KRTAP5-7Q6L8G8 165 aa7.8□□□□□ -1.16
AC009041.3-201ENST00000564390 MT1AP04731 61 aa7.65□□□□□ -1.18
AC009041.3-201ENST00000564390 KRTAP6-1Q3LI64 71 aa7.64□□□□□ -1.19
AC009041.3-201ENST00000564390 KRTAP9-6A8MVA2 160 aa7.58□□□□□ -1.2
AC009041.3-201ENST00000564390 BRK1Q8WUW1 75 aa7.52□□□□□ -1.21
AC009041.3-201ENST00000564390 KRTAP5-2Q701N4 177 aa7.49□□□□□ -1.21
AC009041.3-201ENST00000564390 KRTAP9-4Q9BYQ2 154 aa7.38□□□□□ -1.23
AC009041.3-201ENST00000564390 KRTAP4-11Q9BYQ6 195 aa7.38□□□□□ -1.23
AC009041.3-201ENST00000564390 KRTAP6-2Q3LI66 62 aa7.3□□□□□ -1.24
AC009041.3-201ENST00000564390 KRTAP5-8O75690 187 aa7.14□□□□□ -1.27
AC009041.3-201ENST00000564390 PMAIP1Q13794 54 aa7.08□□□□□ -1.28
AC009041.3-201ENST00000564390 OBSCNQ5VST9 7968 aa7.03□□□□□ -1.28
AC009041.3-201ENST00000564390 MT3P25713 68 aa6.97□□□□□ -1.29
AC009041.3-201ENST00000564390 PRO0628Q9UI54 55 aa6.97□□□□□ -1.29
AC009041.3-201ENST00000564390 MUC5ACP98088 5654 aa6.83□□□□□ -1.32
AC009041.3-201ENST00000564390 PRAC1Q96KF2 57 aa6.82□□□□□ -1.32
AC009041.3-201ENST00000564390 AHNAKQ09666 5890 aaKnown RBP6.82□□□□□ -1.32
AC009041.3-201ENST00000564390 MUC5BQ9HC84 5762 aaPredicted RBP6.81□□□□□ -1.32
AC009041.3-201ENST00000564390 KRTAP9-9Q9BYP9 154 aa6.76□□□□□ -1.33
AC009041.3-201ENST00000564390 KRTAP5-1Q6L8H4 278 aa6.73□□□□□ -1.33
AC009041.3-201ENST00000564390 KTN1-AS1Q86SY8 53 aa6.55□□□□□ -1.36
AC009041.3-201ENST00000564390 LCE1EQ5T753 118 aa6.38□□□□□ -1.39
AC009041.3-201ENST00000564390 SVIPQ8NHG7 77 aa6.17□□□□□ -1.42
AC009041.3-201ENST00000564390 LCE1BQ5T7P3 118 aa6.1□□□□□ -1.43
AC009041.3-201ENST00000564390 KRTAP4-2Q9BYR5 136 aa6.1□□□□□ -1.43
AC009041.3-201ENST00000564390 LCE1CQ5T751 118 aa5.93□□□□□ -1.46
AC009041.3-201ENST00000564390 LCE3DQ9BYE3 92 aa5.74□□□□□ -1.49
AC009041.3-201ENST00000564390 KRTAP4-12Q9BQ66 201 aa5.58□□□□□ -1.52
AC009041.3-201ENST00000564390 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
AC009041.3-201ENST00000564390 KRTAP5-11Q6L8G4 156 aa5.4□□□□□ -1.54
AC009041.3-201ENST00000564390 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.39□□□□□ -1.55
AC009041.3-201ENST00000564390 LCE3EQ5T5B0 92 aa5.38□□□□□ -1.55
AC009041.3-201ENST00000564390 LCE1FQ5T754 118 aa5.2□□□□□ -1.58
AC009041.3-201ENST00000564390 KRTAP21-2Q3LI59 83 aa5.01□□□□□ -1.61
AC009041.3-201ENST00000564390 NDUFAF8A1L188 74 aa4.96□□□□□ -1.62
AC009041.3-201ENST00000564390 PHGR1C9JFL3 82 aa4.75□□□□□ -1.65
AC009041.3-201ENST00000564390 KRTAP4-4Q9BYR3 166 aa4.66□□□□□ -1.66
AC009041.3-201ENST00000564390 MUC19Q7Z5P9 8384 aa4.33□□□□□ -1.72
AC009041.3-201ENST00000564390 PRM1P04553 51 aa4.07□□□□□ -1.76
AC009041.3-201ENST00000564390 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
AC009041.3-201ENST00000564390 INE1O15225 51 aa3.99□□□□□ -1.77
AC009041.3-201ENST00000564390 KRTAP21-1Q3LI58 79 aa3.58□□□□□ -1.84
AC009041.3-201ENST00000564390 H3BS24 57 aa3.13□□□□□ -1.91
AC009041.3-201ENST00000564390 MUC16Q8WXI7 14507 aa3.09□□□□□ -1.92
Retrieved 77 of 20,778 RNA–protein pairs in 562.9 ms