RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 KRTAP8-1Q8IUC2 63 aa3.6□□□□□ -1.83
AC138869.3-201ENST00000563960 KRTAP19-8Q3LI54 63 aa3.59□□□□□ -1.83
AC138869.3-201ENST00000563960 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
AC138869.3-201ENST00000563960 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
AC138869.3-201ENST00000563960 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
AC138869.3-201ENST00000563960 MT1XP80297 61 aa3.46□□□□□ -1.86
AC138869.3-201ENST00000563960 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
AC138869.3-201ENST00000563960 KRTAP10-5P60370 271 aa3.45□□□□□ -1.86
AC138869.3-201ENST00000563960 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
AC138869.3-201ENST00000563960 KMT2DO14686 5537 aa3.39□□□□□ -1.87
AC138869.3-201ENST00000563960 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.87
AC138869.3-201ENST00000563960 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
AC138869.3-201ENST00000563960 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
AC138869.3-201ENST00000563960 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
AC138869.3-201ENST00000563960 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
AC138869.3-201ENST00000563960 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
AC138869.3-201ENST00000563960 SYNE2Q8WXH0 6885 aaKnown RBP3.3□□□□□ -1.88
AC138869.3-201ENST00000563960 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
AC138869.3-201ENST00000563960 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
AC138869.3-201ENST00000563960 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
AC138869.3-201ENST00000563960 LCE1AQ5T7P2 110 aa3.13□□□□□ -1.91
AC138869.3-201ENST00000563960 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
AC138869.3-201ENST00000563960 SPRR2FQ96RM1 72 aa3.1□□□□□ -1.91
AC138869.3-201ENST00000563960 MT3P25713 68 aa3.1□□□□□ -1.91
AC138869.3-201ENST00000563960 KRTAP19-7Q3SYF9 63 aa3.09□□□□□ -1.91
AC138869.3-201ENST00000563960 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
AC138869.3-201ENST00000563960 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
AC138869.3-201ENST00000563960 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
AC138869.3-201ENST00000563960 MT1EP04732 61 aa3.03□□□□□ -1.92
AC138869.3-201ENST00000563960 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
AC138869.3-201ENST00000563960 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
AC138869.3-201ENST00000563960 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
AC138869.3-201ENST00000563960 SPRR2EP22531 72 aa2.96□□□□□ -1.94
AC138869.3-201ENST00000563960 SPRR2BP35325 72 aa2.96□□□□□ -1.94
AC138869.3-201ENST00000563960 SPRR2AP35326 72 aa2.96□□□□□ -1.94
AC138869.3-201ENST00000563960 MT1LQ93083 61 aa2.96□□□□□ -1.94
AC138869.3-201ENST00000563960 NEBP20929 6669 aa2.93□□□□□ -1.94
AC138869.3-201ENST00000563960 DSTQ03001 7570 aaKnown RBP2.93□□□□□ -1.94
AC138869.3-201ENST00000563960 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
AC138869.3-201ENST00000563960 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
AC138869.3-201ENST00000563960 MT1GP13640 62 aa2.88□□□□□ -1.95
AC138869.3-201ENST00000563960 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
AC138869.3-201ENST00000563960 MT1MQ8N339 61 aa2.86□□□□□ -1.95
AC138869.3-201ENST00000563960 SPRR2DP22532 72 aa2.84□□□□□ -1.95
AC138869.3-201ENST00000563960 PRM1P04553 51 aa2.76□□□□□ -1.97
AC138869.3-201ENST00000563960 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.97
AC138869.3-201ENST00000563960 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
AC138869.3-201ENST00000563960 KRTAP20-1Q3LI63 56 aa2.69□□□□□ -1.98
AC138869.3-201ENST00000563960 SYNE1Q8NF91 8797 aaKnown RBP2.69□□□□□ -1.98
AC138869.3-201ENST00000563960 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
AC138869.3-201ENST00000563960 MT1AP04731 61 aa2.65□□□□□ -1.99
AC138869.3-201ENST00000563960 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
AC138869.3-201ENST00000563960 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
AC138869.3-201ENST00000563960 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
AC138869.3-201ENST00000563960 MT4P47944 62 aa2.52□□□□□ -2.01
AC138869.3-201ENST00000563960 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
AC138869.3-201ENST00000563960 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
AC138869.3-201ENST00000563960 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
AC138869.3-201ENST00000563960 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
AC138869.3-201ENST00000563960 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
AC138869.3-201ENST00000563960 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
AC138869.3-201ENST00000563960 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
AC138869.3-201ENST00000563960 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
AC138869.3-201ENST00000563960 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
AC138869.3-201ENST00000563960 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
AC138869.3-201ENST00000563960 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
AC138869.3-201ENST00000563960 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
AC138869.3-201ENST00000563960 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
AC138869.3-201ENST00000563960 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
AC138869.3-201ENST00000563960 MUC5ACP98088 5654 aa1.96□□□□□ -2.1
AC138869.3-201ENST00000563960 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
AC138869.3-201ENST00000563960 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.1
AC138869.3-201ENST00000563960 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
AC138869.3-201ENST00000563960 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
AC138869.3-201ENST00000563960 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
AC138869.3-201ENST00000563960 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
AC138869.3-201ENST00000563960 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 261.9 ms