RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-218ENST00000563686 LCE3BQ5TA77 95 aa1.86□□□□□ -2.11
TCF4-218ENST00000563686 KRTAP19-3Q7Z4W3 81 aa1.86□□□□□ -2.11
TCF4-218ENST00000563686 SPRR2DP22532 72 aa1.84□□□□□ -2.11
TCF4-218ENST00000563686 FAT4Q6V0I7 4981 aa1.84□□□□□ -2.11
TCF4-218ENST00000563686 KRTAP2-3P0C7H8 128 aa1.84□□□□□ -2.12
TCF4-218ENST00000563686 KRTAP2-4Q9BYR9 128 aa1.84□□□□□ -2.12
TCF4-218ENST00000563686 KRTAP2-1Q9BYU5 128 aa1.84□□□□□ -2.12
TCF4-218ENST00000563686 KRTAP19-7Q3SYF9 63 aa1.83□□□□□ -2.12
TCF4-218ENST00000563686 MT1MQ8N339 61 aa1.82□□□□□ -2.12
TCF4-218ENST00000563686 LOC100996750A0A140TA64 210 aa1.82□□□□□ -2.12
TCF4-218ENST00000563686 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
TCF4-218ENST00000563686 KRTAP4-3Q9BYR4 195 aa1.78□□□□□ -2.12
TCF4-218ENST00000563686 MUC2Q02817 5179 aa1.77□□□□□ -2.13
TCF4-218ENST00000563686 KRTAP9-7A8MTY7 169 aa1.77□□□□□ -2.13
TCF4-218ENST00000563686 KRTAP9-6A8MVA2 160 aa1.76□□□□□ -2.13
TCF4-218ENST00000563686 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.75□□□□□ -2.13
TCF4-218ENST00000563686 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
TCF4-218ENST00000563686 LCE3EQ5T5B0 92 aa1.73□□□□□ -2.13
TCF4-218ENST00000563686 MT4P47944 62 aa1.72□□□□□ -2.13
TCF4-218ENST00000563686 KRTAP20-1Q3LI63 56 aa1.71□□□□□ -2.14
TCF4-218ENST00000563686 MT1AP04731 61 aa1.7□□□□□ -2.14
TCF4-218ENST00000563686 SYNE2Q8WXH0 6885 aaKnown RBP1.7□□□□□ -2.14
TCF4-218ENST00000563686 KRTAP6-3Q3LI67 103 aa1.66□□□□□ -2.14
TCF4-218ENST00000563686 FSIP2Q5CZC0 6907 aa1.65□□□□□ -2.14
TCF4-218ENST00000563686 PRM1P04553 51 aa1.65□□□□□ -2.14
TCF4-218ENST00000563686 LCE5AQ5TCM9 118 aa1.65□□□□□ -2.14
TCF4-218ENST00000563686 OBSCNQ5VST9 7968 aa1.65□□□□□ -2.15
TCF4-218ENST00000563686 KRTAP6-1Q3LI64 71 aa1.62□□□□□ -2.15
TCF4-218ENST00000563686 KRTAP4-9Q9BYQ8 210 aa1.62□□□□□ -2.15
TCF4-218ENST00000563686 LCE1BQ5T7P3 118 aa1.61□□□□□ -2.15
TCF4-218ENST00000563686 KRTAP9-4Q9BYQ2 154 aa1.6□□□□□ -2.15
TCF4-218ENST00000563686 LCE1DQ5T752 114 aa1.56□□□□□ -2.16
TCF4-218ENST00000563686 NEBP20929 6669 aa1.56□□□□□ -2.16
TCF4-218ENST00000563686 MACF1Q9UPN3 7388 aaKnown RBP1.55□□□□□ -2.16
TCF4-218ENST00000563686 LCE1AQ5T7P2 110 aa1.55□□□□□ -2.16
TCF4-218ENST00000563686 USH2AO75445 5202 aa1.54□□□□□ -2.16
TCF4-218ENST00000563686 KRTAP6-2Q3LI66 62 aa1.54□□□□□ -2.16
TCF4-218ENST00000563686 SSPOA2VEC9 5147 aa1.53□□□□□ -2.17
TCF4-218ENST00000563686 KRTAP2-2Q9BYT5 123 aa1.52□□□□□ -2.17
TCF4-218ENST00000563686 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
TCF4-218ENST00000563686 LCE1EQ5T753 118 aa1.51□□□□□ -2.17
TCF4-218ENST00000563686 LCE1FQ5T754 118 aa1.51□□□□□ -2.17
TCF4-218ENST00000563686 KMT2DO14686 5537 aa1.48□□□□□ -2.17
TCF4-218ENST00000563686 KRTAP5-9P26371 169 aa1.47□□□□□ -2.17
TCF4-218ENST00000563686 LCE4AQ5TA78 99 aa1.46□□□□□ -2.18
TCF4-218ENST00000563686 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
TCF4-218ENST00000563686 KRTAP5-5Q701N2 237 aaPredicted RBP1.42□□□□□ -2.18
TCF4-218ENST00000563686 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
TCF4-218ENST00000563686 MUC19Q7Z5P9 8384 aa1.36□□□□□ -2.19
TCF4-218ENST00000563686 KRTAP9-9Q9BYP9 154 aa1.36□□□□□ -2.19
TCF4-218ENST00000563686 KRTAP4-6Q9BYQ5 205 aa1.35□□□□□ -2.19
TCF4-218ENST00000563686 KRTAP5-4Q6L8H1 288 aa1.33□□□□□ -2.2
TCF4-218ENST00000563686 MUC12Q9UKN1 5478 aa1.31□□□□□ -2.2
TCF4-218ENST00000563686 KRTAP20-2Q3LI61 65 aa1.3□□□□□ -2.2
TCF4-218ENST00000563686 MDN1Q9NU22 5596 aa1.28□□□□□ -2.2
TCF4-218ENST00000563686 DSTQ03001 7570 aaKnown RBP1.25□□□□□ -2.21
TCF4-218ENST00000563686 KRTAP4-12Q9BQ66 201 aa1.24□□□□□ -2.21
TCF4-218ENST00000563686 GPR98Q8WXG9 6306 aa1.23□□□□□ -2.21
TCF4-218ENST00000563686 KRTAP5-3Q6L8H2 238 aa1.22□□□□□ -2.21
TCF4-218ENST00000563686 KRTAP4-11Q9BYQ6 195 aa1.21□□□□□ -2.22
TCF4-218ENST00000563686 KRTAP5-2Q701N4 177 aa1.18□□□□□ -2.22
TCF4-218ENST00000563686 KRTAP4-2Q9BYR5 136 aa1.16□□□□□ -2.22
TCF4-218ENST00000563686 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.16□□□□□ -2.22
TCF4-218ENST00000563686 KRTAP4-4Q9BYR3 166 aa1.13□□□□□ -2.23
TCF4-218ENST00000563686 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
TCF4-218ENST00000563686 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
TCF4-218ENST00000563686 KRTAP5-8O75690 187 aa1.02□□□□□ -2.25
TCF4-218ENST00000563686 HMCN1Q96RW7 5635 aa1.02□□□□□ -2.25
TCF4-218ENST00000563686 KRTAP5-7Q6L8G8 165 aa1□□□□□ -2.25
TCF4-218ENST00000563686 KRTAP5-1Q6L8H4 278 aa0.98□□□□□ -2.25
TCF4-218ENST00000563686 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
TCF4-218ENST00000563686 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
TCF4-218ENST00000563686 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
TCF4-218ENST00000563686 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
TCF4-218ENST00000563686 KRTAP5-11Q6L8G4 156 aa0.9□□□□□ -2.27
TCF4-218ENST00000563686 AHNAKQ09666 5890 aaKnown RBP0.88□□□□□ -2.27
TCF4-218ENST00000563686 MUC5BQ9HC84 5762 aaPredicted RBP0.86□□□□□ -2.27
TCF4-218ENST00000563686 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 168.6 ms