RNA–Protein interactions for RNA: ENST00000561080.5

SLC12A6-219, Transcript of solute carrier family 12 member 6, humanhuman

TSL 1 (best)

Gene SLC12A6, Length 5,407 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A6-219ENST00000561080 SYNE2Q8WXH0 6885 aaKnown RBP5.82□□□□□ -1.48
SLC12A6-219ENST00000561080 MT1EP04732 61 aa5.82□□□□□ -1.48
SLC12A6-219ENST00000561080 KRTAP2-3P0C7H8 128 aa5.82□□□□□ -1.48
SLC12A6-219ENST00000561080 KRTAP2-4Q9BYR9 128 aa5.82□□□□□ -1.48
SLC12A6-219ENST00000561080 LPAP08519 4548 aa5.81□□□□□ -1.48
SLC12A6-219ENST00000561080 MT1LQ93083 61 aa5.79□□□□□ -1.48
SLC12A6-219ENST00000561080 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
SLC12A6-219ENST00000561080 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
SLC12A6-219ENST00000561080 MT1MQ8N339 61 aa5.68□□□□□ -1.5
SLC12A6-219ENST00000561080 TNXBP22105 4242 aa5.68□□□□□ -1.5
SLC12A6-219ENST00000561080 MUC17Q685J3 4493 aa5.67□□□□□ -1.5
SLC12A6-219ENST00000561080 LCE3DQ9BYE3 92 aa5.66□□□□□ -1.5
SLC12A6-219ENST00000561080 MT3P25713 68 aa5.65□□□□□ -1.5
SLC12A6-219ENST00000561080 FLGP20930 4061 aaPredicted RBP5.61□□□□□ -1.51
SLC12A6-219ENST00000561080 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
SLC12A6-219ENST00000561080 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
SLC12A6-219ENST00000561080 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
SLC12A6-219ENST00000561080 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
SLC12A6-219ENST00000561080 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
SLC12A6-219ENST00000561080 LCE1AQ5T7P2 110 aa5.53□□□□□ -1.52
SLC12A6-219ENST00000561080 MUC2Q02817 5179 aa5.52□□□□□ -1.53
SLC12A6-219ENST00000561080 LCE1BQ5T7P3 118 aa5.51□□□□□ -1.53
SLC12A6-219ENST00000561080 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
SLC12A6-219ENST00000561080 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.53
SLC12A6-219ENST00000561080 KRTAP4-3Q9BYR4 195 aa5.38□□□□□ -1.55
SLC12A6-219ENST00000561080 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
SLC12A6-219ENST00000561080 LCE4AQ5TA78 99 aa5.37□□□□□ -1.55
SLC12A6-219ENST00000561080 LCE5AQ5TCM9 118 aa5.31□□□□□ -1.56
SLC12A6-219ENST00000561080 LOC100996750A0A140TA64 210 aa5.29□□□□□ -1.56
SLC12A6-219ENST00000561080 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
SLC12A6-219ENST00000561080 MT1AP04731 61 aa5.26□□□□□ -1.57
SLC12A6-219ENST00000561080 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
SLC12A6-219ENST00000561080 NEBP20929 6669 aa4.96□□□□□ -1.62
SLC12A6-219ENST00000561080 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
SLC12A6-219ENST00000561080 KRTAP6-2Q3LI66 62 aa4.91□□□□□ -1.62
SLC12A6-219ENST00000561080 GPR98Q8WXG9 6306 aa4.9□□□□□ -1.63
SLC12A6-219ENST00000561080 LCE1CQ5T751 118 aa4.88□□□□□ -1.63
SLC12A6-219ENST00000561080 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
SLC12A6-219ENST00000561080 LCE1FQ5T754 118 aa4.88□□□□□ -1.63
SLC12A6-219ENST00000561080 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
SLC12A6-219ENST00000561080 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
SLC12A6-219ENST00000561080 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
SLC12A6-219ENST00000561080 PRM1P04553 51 aa4.78□□□□□ -1.64
SLC12A6-219ENST00000561080 KMT2DO14686 5537 aa4.77□□□□□ -1.65
SLC12A6-219ENST00000561080 KRTAP5-9P26371 169 aa4.71□□□□□ -1.65
SLC12A6-219ENST00000561080 DSTQ03001 7570 aaKnown RBP4.71□□□□□ -1.66
SLC12A6-219ENST00000561080 USH2AO75445 5202 aa4.7□□□□□ -1.66
SLC12A6-219ENST00000561080 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
SLC12A6-219ENST00000561080 MDN1Q9NU22 5596 aa4.5□□□□□ -1.69
SLC12A6-219ENST00000561080 FCGBPQ9Y6R7 5405 aaPredicted RBP4.47□□□□□ -1.69
SLC12A6-219ENST00000561080 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
SLC12A6-219ENST00000561080 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
SLC12A6-219ENST00000561080 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
SLC12A6-219ENST00000561080 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
SLC12A6-219ENST00000561080 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
SLC12A6-219ENST00000561080 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
SLC12A6-219ENST00000561080 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
SLC12A6-219ENST00000561080 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
SLC12A6-219ENST00000561080 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
SLC12A6-219ENST00000561080 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.78
SLC12A6-219ENST00000561080 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
SLC12A6-219ENST00000561080 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
SLC12A6-219ENST00000561080 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
SLC12A6-219ENST00000561080 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
SLC12A6-219ENST00000561080 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
SLC12A6-219ENST00000561080 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
SLC12A6-219ENST00000561080 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
SLC12A6-219ENST00000561080 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
SLC12A6-219ENST00000561080 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
SLC12A6-219ENST00000561080 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
SLC12A6-219ENST00000561080 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.94
SLC12A6-219ENST00000561080 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
SLC12A6-219ENST00000561080 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
SLC12A6-219ENST00000561080 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
SLC12A6-219ENST00000561080 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
SLC12A6-219ENST00000561080 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
SLC12A6-219ENST00000561080 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
SLC12A6-219ENST00000561080 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 21.2 ms