RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 KRTAP25-1Q3LHN0 102 aa0.83□□□□□ -2.28
HERC1-211ENST00000560983 SPINT4Q6UDR6 99 aa0.83□□□□□ -2.28
HERC1-211ENST00000560983 DMAC1Q96GE9 116 aa0.83□□□□□ -2.28
HERC1-211ENST00000560983 VAMP8Q9BV40 100 aa0.83□□□□□ -2.28
HERC1-211ENST00000560983 ATOX1O00244 68 aa0.82□□□□□ -2.28
HERC1-211ENST00000560983 LINC00208Q96KT6 92 aa0.82□□□□□ -2.28
HERC1-211ENST00000560983 UQCRQO14949 82 aa0.81□□□□□ -2.28
HERC1-211ENST00000560983 SPATA45Q537H7 98 aa0.81□□□□□ -2.28
HERC1-211ENST00000560983 HSD52Q0P140 79 aa0.8□□□□□ -2.28
HERC1-211ENST00000560983 TRAV7A0A075B6U4 112 aa0.79□□□□□ -2.28
HERC1-211ENST00000560983 UBL5Q9BZL1 73 aa0.79□□□□□ -2.28
HERC1-211ENST00000560983 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
HERC1-211ENST00000560983 SPATA8Q6RVD6 105 aa0.77□□□□□ -2.29
HERC1-211ENST00000560983 S100A2P29034 98 aa0.76□□□□□ -2.29
HERC1-211ENST00000560983 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
HERC1-211ENST00000560983 TSTD3H0UI37 97 aa0.75□□□□□ -2.29
HERC1-211ENST00000560983 SPTSSBQ8NFR3 76 aa0.75□□□□□ -2.29
HERC1-211ENST00000560983 H3BT86 120 aa0.74□□□□□ -2.29
HERC1-211ENST00000560983 TAX1BP3O14907 124 aa0.74□□□□□ -2.29
HERC1-211ENST00000560983 ACYP2P14621 99 aa0.72□□□□□ -2.29
HERC1-211ENST00000560983 MP68P56378 58 aa0.7□□□□□ -2.3
HERC1-211ENST00000560983 SPANXA2-OT1Q8N9U9 137 aa0.69□□□□□ -2.3
HERC1-211ENST00000560983 S100A6P06703 90 aa0.68□□□□□ -2.3
HERC1-211ENST00000560983 A0A1B0GU33 70 aa0.67□□□□□ -2.3
HERC1-211ENST00000560983 CHKB-CPT1BH3BT56 60 aa0.67□□□□□ -2.3
HERC1-211ENST00000560983 SCGB1A1P11684 91 aa0.66□□□□□ -2.3
HERC1-211ENST00000560983 UQCR10Q9UDW1 63 aa0.66□□□□□ -2.3
HERC1-211ENST00000560983 H3BPC8 53 aa0.65□□□□□ -2.31
HERC1-211ENST00000560983 S100A1P23297 94 aa0.65□□□□□ -2.31
HERC1-211ENST00000560983 HIST1H4AP62805 103 aaKnown RBP0.64□□□□□ -2.31
HERC1-211ENST00000560983 SMIM26A0A096LP01 95 aa0.63□□□□□ -2.31
HERC1-211ENST00000560983 PYY3Q5JQD4 70 aa0.62□□□□□ -2.31
HERC1-211ENST00000560983 SERP1Q9Y6X1 66 aa0.62□□□□□ -2.31
HERC1-211ENST00000560983 PCP4L1A6NKN8 68 aa0.6□□□□□ -2.31
HERC1-211ENST00000560983 M0R143 59 aa0.6□□□□□ -2.31
HERC1-211ENST00000560983 SEC61GP60059 68 aa0.6□□□□□ -2.31
HERC1-211ENST00000560983 ATP5EP2Q5VTU8 51 aa0.57□□□□□ -2.32
HERC1-211ENST00000560983 H7BZZ5 65 aa0.54□□□□□ -2.32
HERC1-211ENST00000560983 SERP2Q8N6R1 65 aa0.53□□□□□ -2.32
HERC1-211ENST00000560983 ETDBQ3ZM63 59 aa0.52□□□□□ -2.33
HERC1-211ENST00000560983 LUZP6Q538Z0 58 aa0.52□□□□□ -2.33
HERC1-211ENST00000560983 COA5Q86WW8 74 aa0.51□□□□□ -2.33
HERC1-211ENST00000560983 LINC00643Q86TS7 51 aa0.49□□□□□ -2.33
HERC1-211ENST00000560983 FAM240AA0A1B0GVK7 77 aa0.48□□□□□ -2.33
HERC1-211ENST00000560983 A0A1B0GU69 56 aa0.47□□□□□ -2.33
HERC1-211ENST00000560983 F8W1H4 67 aa0.47□□□□□ -2.33
HERC1-211ENST00000560983 SNURFQ9Y675 71 aa0.46□□□□□ -2.34
HERC1-211ENST00000560983 PRR15LQ9BU68 103 aa0.44□□□□□ -2.34
HERC1-211ENST00000560983 RPS28P62857 69 aaKnown RBP0.43□□□□□ -2.34
HERC1-211ENST00000560983 PSPHP1O15172 72 aa0.42□□□□□ -2.34
HERC1-211ENST00000560983 GTF2H5Q6ZYL4 71 aa0.38□□□□□ -2.35
HERC1-211ENST00000560983 SMIM20Q8N5G0 67 aa0.36□□□□□ -2.35
HERC1-211ENST00000560983 K7ERS5 55 aa0.35□□□□□ -2.35
HERC1-211ENST00000560983 COL5A1-AS1Q5SY13 56 aa0.35□□□□□ -2.35
HERC1-211ENST00000560983 UQCR11O14957 56 aa0.32□□□□□ -2.36
HERC1-211ENST00000560983 SMIM6P0DI80 62 aa0.3□□□□□ -2.36
HERC1-211ENST00000560983 MIR22HGQ0VDD5 57 aa0.29□□□□□ -2.36
HERC1-211ENST00000560983 PRO0628Q9UI54 55 aa0.28□□□□□ -2.36
HERC1-211ENST00000560983 LINC01558Q9Y6Z2 57 aa0.28□□□□□ -2.36
HERC1-211ENST00000560983 A6NED7 52 aa0.27□□□□□ -2.37
HERC1-211ENST00000560983 ROMO1P60602 79 aa0.26□□□□□ -2.37
HERC1-211ENST00000560983 Q1T7F1 81 aa0.26□□□□□ -2.37
HERC1-211ENST00000560983 CDC42SE1Q9NRR8 79 aa0.26□□□□□ -2.37
HERC1-211ENST00000560983 ANAPC13Q9BS18 74 aa0.2□□□□□ -2.38
HERC1-211ENST00000560983 J3QR89 54 aa0.15□□□□□ -2.39
HERC1-211ENST00000560983 COX7CP15954 63 aa0.14□□□□□ -2.39
HERC1-211ENST00000560983 LOC105371267A0A1B0GV96 52 aa0.12□□□□□ -2.39
HERC1-211ENST00000560983 PRM1P04553 51 aa0.12□□□□□ -2.39
HERC1-211ENST00000560983 V9GYY9 64 aa0.1□□□□□ -2.39
HERC1-211ENST00000560983 A0A1B0GV90 55 aa0.06□□□□□ -2.4
HERC1-211ENST00000560983 TMEM258P61165 79 aa0.04□□□□□ -2.4
HERC1-211ENST00000560983 ATP5EP56381 51 aaPredicted RBP0.02□□□□□ -2.41
HERC1-211ENST00000560983 KTN1-AS1Q86SY8 53 aa0.02□□□□□ -2.41
HERC1-211ENST00000560983 K7ERU9 68 aa-0.02□□□□□ -2.41
HERC1-211ENST00000560983 CCDC179H3BU77 68 aa-0.03□□□□□ -2.41
HERC1-211ENST00000560983 INE1O15225 51 aa-0.07□□□□□ -2.42
HERC1-211ENST00000560983 PMAIP1Q13794 54 aa-0.15□□□□□ -2.43
HERC1-211ENST00000560983 BRK1Q8WUW1 75 aa-0.29□□□□□ -2.46
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms