RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.62
CRTC3-210ENST00000560927 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.62
CRTC3-210ENST00000560927 KRTAP2-1Q9BYU5 128 aa4.9□□□□□ -1.62
CRTC3-210ENST00000560927 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
CRTC3-210ENST00000560927 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
CRTC3-210ENST00000560927 LOC100996750A0A140TA64 210 aa4.82□□□□□ -1.64
CRTC3-210ENST00000560927 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
CRTC3-210ENST00000560927 MT1MQ8N339 61 aa4.78□□□□□ -1.64
CRTC3-210ENST00000560927 MT1GP13640 62 aa4.77□□□□□ -1.65
CRTC3-210ENST00000560927 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
CRTC3-210ENST00000560927 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
CRTC3-210ENST00000560927 MACF1Q9UPN3 7388 aaKnown RBP4.67□□□□□ -1.66
CRTC3-210ENST00000560927 CRCT1Q9UGL9 99 aa4.66□□□□□ -1.66
CRTC3-210ENST00000560927 LCE5AQ5TCM9 118 aa4.65□□□□□ -1.67
CRTC3-210ENST00000560927 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
CRTC3-210ENST00000560927 SYNE2Q8WXH0 6885 aaKnown RBP4.52□□□□□ -1.69
CRTC3-210ENST00000560927 MDN1Q9NU22 5596 aa4.47□□□□□ -1.69
CRTC3-210ENST00000560927 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
CRTC3-210ENST00000560927 KRTAP9-2Q9BYQ4 174 aa4.45□□□□□ -1.7
CRTC3-210ENST00000560927 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
CRTC3-210ENST00000560927 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
CRTC3-210ENST00000560927 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
CRTC3-210ENST00000560927 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
CRTC3-210ENST00000560927 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
CRTC3-210ENST00000560927 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
CRTC3-210ENST00000560927 SPRR2EP22531 72 aa4.27□□□□□ -1.73
CRTC3-210ENST00000560927 SPRR2BP35325 72 aa4.27□□□□□ -1.73
CRTC3-210ENST00000560927 SPRR2AP35326 72 aa4.27□□□□□ -1.73
CRTC3-210ENST00000560927 MT1AP04731 61 aa4.27□□□□□ -1.73
CRTC3-210ENST00000560927 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
CRTC3-210ENST00000560927 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
CRTC3-210ENST00000560927 SPRR2DP22532 72 aa4.08□□□□□ -1.76
CRTC3-210ENST00000560927 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
CRTC3-210ENST00000560927 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
CRTC3-210ENST00000560927 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.02□□□□□ -1.77
CRTC3-210ENST00000560927 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
CRTC3-210ENST00000560927 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
CRTC3-210ENST00000560927 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
CRTC3-210ENST00000560927 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.78
CRTC3-210ENST00000560927 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
CRTC3-210ENST00000560927 MT3P25713 68 aa3.83□□□□□ -1.8
CRTC3-210ENST00000560927 PRM1P04553 51 aa3.81□□□□□ -1.8
CRTC3-210ENST00000560927 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
CRTC3-210ENST00000560927 NEBP20929 6669 aa3.74□□□□□ -1.81
CRTC3-210ENST00000560927 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
CRTC3-210ENST00000560927 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
CRTC3-210ENST00000560927 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
CRTC3-210ENST00000560927 MT4P47944 62 aa3.62□□□□□ -1.83
CRTC3-210ENST00000560927 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
CRTC3-210ENST00000560927 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
CRTC3-210ENST00000560927 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
CRTC3-210ENST00000560927 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
CRTC3-210ENST00000560927 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
CRTC3-210ENST00000560927 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
CRTC3-210ENST00000560927 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
CRTC3-210ENST00000560927 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
CRTC3-210ENST00000560927 KRTAP5-3Q6L8H2 238 aa3.38□□□□□ -1.87
CRTC3-210ENST00000560927 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
CRTC3-210ENST00000560927 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
CRTC3-210ENST00000560927 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
CRTC3-210ENST00000560927 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
CRTC3-210ENST00000560927 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
CRTC3-210ENST00000560927 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
CRTC3-210ENST00000560927 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
CRTC3-210ENST00000560927 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
CRTC3-210ENST00000560927 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
CRTC3-210ENST00000560927 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
CRTC3-210ENST00000560927 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.96
CRTC3-210ENST00000560927 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
CRTC3-210ENST00000560927 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
CRTC3-210ENST00000560927 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
CRTC3-210ENST00000560927 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
CRTC3-210ENST00000560927 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
CRTC3-210ENST00000560927 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
CRTC3-210ENST00000560927 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
CRTC3-210ENST00000560927 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
CRTC3-210ENST00000560927 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
CRTC3-210ENST00000560927 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 309.2 ms