RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.04
ZEB1-220ENST00000560909 UQCR11O14957 56 aa2.33□□□□□ -2.04
ZEB1-220ENST00000560909 PSPHP1O15172 72 aa2.33□□□□□ -2.04
ZEB1-220ENST00000560909 CRCT1Q9UGL9 99 aa2.32□□□□□ -2.04
ZEB1-220ENST00000560909 KRTAP12-1P59990 96 aa2.31□□□□□ -2.04
ZEB1-220ENST00000560909 NDUFAF8A1L188 74 aa2.3□□□□□ -2.04
ZEB1-220ENST00000560909 LINC01554Q52M75 96 aa2.3□□□□□ -2.04
ZEB1-220ENST00000560909 PLAC4Q8WY50 150 aa2.3□□□□□ -2.04
ZEB1-220ENST00000560909 A8MU10 97 aa2.29□□□□□ -2.04
ZEB1-220ENST00000560909 MT1XP80297 61 aa2.29□□□□□ -2.04
ZEB1-220ENST00000560909 MIR22HGQ0VDD5 57 aa2.29□□□□□ -2.04
ZEB1-220ENST00000560909 A0A0D9SG42 100 aa2.28□□□□□ -2.04
ZEB1-220ENST00000560909 KRTAP12-2P59991 146 aa2.28□□□□□ -2.04
ZEB1-220ENST00000560909 A6NED7 52 aa2.25□□□□□ -2.05
ZEB1-220ENST00000560909 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
ZEB1-220ENST00000560909 SPINT4Q6UDR6 99 aa2.24□□□□□ -2.05
ZEB1-220ENST00000560909 PRO2289Q9P1D8 64 aa2.24□□□□□ -2.05
ZEB1-220ENST00000560909 LCE3EQ5T5B0 92 aa2.22□□□□□ -2.05
ZEB1-220ENST00000560909 MACF1Q9UPN3 7388 aaKnown RBP2.22□□□□□ -2.05
ZEB1-220ENST00000560909 CAMK2N1Q7Z7J9 78 aa2.21□□□□□ -2.06
ZEB1-220ENST00000560909 C10orf95Q9H7T3 257 aa2.19□□□□□ -2.06
ZEB1-220ENST00000560909 K7ERS5 55 aa2.18□□□□□ -2.06
ZEB1-220ENST00000560909 SYNE2Q8WXH0 6885 aaKnown RBP2.17□□□□□ -2.06
ZEB1-220ENST00000560909 KMT2DO14686 5537 aa2.16□□□□□ -2.06
ZEB1-220ENST00000560909 BRK1Q8WUW1 75 aa2.13□□□□□ -2.07
ZEB1-220ENST00000560909 TNP1P09430 55 aa2.12□□□□□ -2.07
ZEB1-220ENST00000560909 KRTAP25-1Q3LHN0 102 aa2.12□□□□□ -2.07
ZEB1-220ENST00000560909 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
ZEB1-220ENST00000560909 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
ZEB1-220ENST00000560909 ROMO1P60602 79 aa2.1□□□□□ -2.07
ZEB1-220ENST00000560909 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
ZEB1-220ENST00000560909 PRO0628Q9UI54 55 aa2.08□□□□□ -2.08
ZEB1-220ENST00000560909 KRTAP19-7Q3SYF9 63 aa2.06□□□□□ -2.08
ZEB1-220ENST00000560909 KRTAP8-1Q8IUC2 63 aa2.06□□□□□ -2.08
ZEB1-220ENST00000560909 MDN1Q9NU22 5596 aa2.06□□□□□ -2.08
ZEB1-220ENST00000560909 NEBP20929 6669 aa2.04□□□□□ -2.08
ZEB1-220ENST00000560909 PMAIP1Q13794 54 aa2.03□□□□□ -2.08
ZEB1-220ENST00000560909 MT1EP04732 61 aa2.02□□□□□ -2.09
ZEB1-220ENST00000560909 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
ZEB1-220ENST00000560909 PP632Q6XCG6 107 aa2.02□□□□□ -2.09
ZEB1-220ENST00000560909 SPRR2FQ96RM1 72 aa2.01□□□□□ -2.09
ZEB1-220ENST00000560909 KRTAP12-3P60328 96 aa1.99□□□□□ -2.09
ZEB1-220ENST00000560909 KRTAP19-3Q7Z4W3 81 aa1.96□□□□□ -2.1
ZEB1-220ENST00000560909 MT1LQ93083 61 aa1.96□□□□□ -2.1
ZEB1-220ENST00000560909 MT1GP13640 62 aa1.94□□□□□ -2.1
ZEB1-220ENST00000560909 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
ZEB1-220ENST00000560909 SPRR2EP22531 72 aa1.93□□□□□ -2.1
ZEB1-220ENST00000560909 SPRR2BP35325 72 aa1.93□□□□□ -2.1
ZEB1-220ENST00000560909 SPRR2AP35326 72 aa1.93□□□□□ -2.1
ZEB1-220ENST00000560909 KTN1-AS1Q86SY8 53 aa1.92□□□□□ -2.1
ZEB1-220ENST00000560909 MT1MQ8N339 61 aa1.9□□□□□ -2.11
ZEB1-220ENST00000560909 DSTQ03001 7570 aaKnown RBP1.87□□□□□ -2.11
ZEB1-220ENST00000560909 SPRR2DP22532 72 aa1.86□□□□□ -2.11
ZEB1-220ENST00000560909 KRTAP2-3P0C7H8 128 aa1.85□□□□□ -2.11
ZEB1-220ENST00000560909 KRTAP2-4Q9BYR9 128 aa1.85□□□□□ -2.11
ZEB1-220ENST00000560909 KRTAP20-1Q3LI63 56 aa1.83□□□□□ -2.12
ZEB1-220ENST00000560909 KRTAP2-1Q9BYU5 128 aa1.8□□□□□ -2.12
ZEB1-220ENST00000560909 SPRR5A0A1B0GTR4 108 aa1.79□□□□□ -2.12
ZEB1-220ENST00000560909 GPR98Q8WXG9 6306 aa1.71□□□□□ -2.14
ZEB1-220ENST00000560909 SYNE1Q8NF91 8797 aaKnown RBP1.71□□□□□ -2.14
ZEB1-220ENST00000560909 LCE3DQ9BYE3 92 aa1.7□□□□□ -2.14
ZEB1-220ENST00000560909 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
ZEB1-220ENST00000560909 MT1AP04731 61 aa1.67□□□□□ -2.14
ZEB1-220ENST00000560909 KRTAP6-1Q3LI64 71 aa1.64□□□□□ -2.15
ZEB1-220ENST00000560909 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
ZEB1-220ENST00000560909 MT4P47944 62 aa1.6□□□□□ -2.15
ZEB1-220ENST00000560909 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
ZEB1-220ENST00000560909 LUZP6Q538Z0 58 aa1.56□□□□□ -2.16
ZEB1-220ENST00000560909 KRTAP5-10Q6L8G5 202 aa1.55□□□□□ -2.16
ZEB1-220ENST00000560909 KRTAP6-2Q3LI66 62 aa1.52□□□□□ -2.17
ZEB1-220ENST00000560909 MUC5ACP98088 5654 aa1.39□□□□□ -2.19
ZEB1-220ENST00000560909 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.2
ZEB1-220ENST00000560909 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.2
ZEB1-220ENST00000560909 INE1O15225 51 aa1.23□□□□□ -2.21
ZEB1-220ENST00000560909 PRM1P04553 51 aa1.07□□□□□ -2.24
ZEB1-220ENST00000560909 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
ZEB1-220ENST00000560909 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
ZEB1-220ENST00000560909 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 63.5 ms