RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-222	ENST00000560731	OBSCN	Q5VST9	7968 aa		3.4	□□□□□ -1.87
MARK3-222	ENST00000560731	KRTAP12-2	P59991	146 aa		3.39	□□□□□ -1.87
MARK3-222	ENST00000560731	SPINT4	Q6UDR6	99 aa		3.37	□□□□□ -1.87
MARK3-222	ENST00000560731	KRTAP19-8	Q3LI54	63 aa		3.35	□□□□□ -1.87
MARK3-222	ENST00000560731	KRTAP4-3	Q9BYR4	195 aa		3.32	□□□□□ -1.88
MARK3-222	ENST00000560731	LCE3A	Q5TA76	89 aa		3.31	□□□□□ -1.88
MARK3-222	ENST00000560731	MT1B	P07438	61 aa		3.29	□□□□□ -1.88
MARK3-222	ENST00000560731	PLAC4	Q8WY50	150 aa		3.29	□□□□□ -1.88
MARK3-222	ENST00000560731	ROMO1	P60602	79 aa		3.28	□□□□□ -1.88
MARK3-222	ENST00000560731	KTN1-AS1	Q86SY8	53 aa		3.24	□□□□□ -1.89
MARK3-222	ENST00000560731	C10orf95	Q9H7T3	257 aa		3.24	□□□□□ -1.89
MARK3-222	ENST00000560731	MT1X	P80297	61 aa		3.17	□□□□□ -1.9
MARK3-222	ENST00000560731	KRTAP25-1	Q3LHN0	102 aa		3.16	□□□□□ -1.9
MARK3-222	ENST00000560731	PRO2289	Q9P1D8	64 aa		3.13	□□□□□ -1.91
MARK3-222	ENST00000560731	USH2A	O75445	5202 aa		3.13	□□□□□ -1.91
MARK3-222	ENST00000560731	TNP1	P09430	55 aa		3.12	□□□□□ -1.91
MARK3-222	ENST00000560731	KRTAP19-6	Q3LI70	58 aa		3.09	□□□□□ -1.91
MARK3-222	ENST00000560731	PP632	Q6XCG6	107 aa		3.05	□□□□□ -1.92
MARK3-222	ENST00000560731	KRTAP5-2	Q701N4	177 aa		3.05	□□□□□ -1.92
MARK3-222	ENST00000560731	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.04	□□□□□ -1.92
MARK3-222	ENST00000560731	SSPO	A2VEC9	5147 aa		3	□□□□□ -1.93
MARK3-222	ENST00000560731	KRTAP8-1	Q8IUC2	63 aa		2.96	□□□□□ -1.94
MARK3-222	ENST00000560731	CRCT1	Q9UGL9	99 aa		2.93	□□□□□ -1.94
MARK3-222	ENST00000560731	SPRR5	A0A1B0GTR4	108 aa		2.92	□□□□□ -1.94
MARK3-222	ENST00000560731	LCE1C	Q5T751	118 aa		2.92	□□□□□ -1.94
MARK3-222	ENST00000560731	LCE1B	Q5T7P3	118 aa		2.92	□□□□□ -1.94
MARK3-222	ENST00000560731	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	2.91	□□□□□ -1.94
MARK3-222	ENST00000560731	FSIP2	Q5CZC0	6907 aa		2.9	□□□□□ -1.94
MARK3-222	ENST00000560731	KRTAP12-3	P60328	96 aa		2.88	□□□□□ -1.95
MARK3-222	ENST00000560731	LCE3D	Q9BYE3	92 aa		2.88	□□□□□ -1.95
MARK3-222	ENST00000560731	KRTAP19-5	Q3LI72	72 aa		2.87	□□□□□ -1.95
MARK3-222	ENST00000560731	LUZP6	Q538Z0	58 aa		2.86	□□□□□ -1.95
MARK3-222	ENST00000560731	KRTAP19-7	Q3SYF9	63 aa		2.84	□□□□□ -1.95
MARK3-222	ENST00000560731	KMT2D	O14686	5537 aa		2.79	□□□□□ -1.96
MARK3-222	ENST00000560731	MT1E	P04732	61 aa		2.78	□□□□□ -1.96
MARK3-222	ENST00000560731	MT1L	Q93083	61 aa		2.74	□□□□□ -1.97
MARK3-222	ENST00000560731	SPRR2F	Q96RM1	72 aa		2.69	□□□□□ -1.98
MARK3-222	ENST00000560731	MACF1	Q9UPN3	7388 aa	Known RBP	2.68	□□□□□ -1.98
MARK3-222	ENST00000560731	MT1G	P13640	62 aa		2.67	□□□□□ -1.98
MARK3-222	ENST00000560731	KRTAP6-3	Q3LI67	103 aa		2.67	□□□□□ -1.98
MARK3-222	ENST00000560731	KRTAP19-3	Q7Z4W3	81 aa		2.67	□□□□□ -1.98
MARK3-222	ENST00000560731	MT1M	Q8N339	61 aa		2.62	□□□□□ -1.99
MARK3-222	ENST00000560731	SYNE2	Q8WXH0	6885 aa	Known RBP	2.61	□□□□□ -1.99
MARK3-222	ENST00000560731	MUC12	Q9UKN1	5478 aa		2.6	□□□□□ -1.99
MARK3-222	ENST00000560731	SPRR2E	P22531	72 aa		2.56	□□□□□ -2
MARK3-222	ENST00000560731	SPRR2B	P35325	72 aa		2.56	□□□□□ -2
MARK3-222	ENST00000560731	SPRR2A	P35326	72 aa		2.56	□□□□□ -2
MARK3-222	ENST00000560731	KRTAP5-8	O75690	187 aa		2.54	□□□□□ -2
MARK3-222	ENST00000560731	MDN1	Q9NU22	5596 aa		2.5	□□□□□ -2.01
MARK3-222	ENST00000560731	SPRR2D	P22532	72 aa		2.47	□□□□□ -2.01
MARK3-222	ENST00000560731	NEB	P20929	6669 aa		2.42	□□□□□ -2.02
MARK3-222	ENST00000560731	MUC19	Q7Z5P9	8384 aa		2.39	□□□□□ -2.03
MARK3-222	ENST00000560731	KRTAP2-3	P0C7H8	128 aa		2.38	□□□□□ -2.03
MARK3-222	ENST00000560731	KRTAP2-4	Q9BYR9	128 aa		2.38	□□□□□ -2.03
MARK3-222	ENST00000560731	KRTAP2-1	Q9BYU5	128 aa		2.38	□□□□□ -2.03
MARK3-222	ENST00000560731	KRTAP5-7	Q6L8G8	165 aa		2.37	□□□□□ -2.03
MARK3-222	ENST00000560731	DST	Q03001	7570 aa	Known RBP	2.36	□□□□□ -2.03
MARK3-222	ENST00000560731	MT1A	P04731	61 aa		2.33	□□□□□ -2.04
MARK3-222	ENST00000560731	KRTAP6-1	Q3LI64	71 aa		2.29	□□□□□ -2.04
MARK3-222	ENST00000560731	KRTAP20-1	Q3LI63	56 aa		2.26	□□□□□ -2.05
MARK3-222	ENST00000560731	KRTAP12-4	P60329	112 aa		2.19	□□□□□ -2.06
MARK3-222	ENST00000560731	SYNE1	Q8NF91	8797 aa	Known RBP	2.18	□□□□□ -2.06
MARK3-222	ENST00000560731	MT4	P47944	62 aa		2.13	□□□□□ -2.07
MARK3-222	ENST00000560731	KRTAP20-2	Q3LI61	65 aa		2.11	□□□□□ -2.07
MARK3-222	ENST00000560731	KRTAP6-2	Q3LI66	62 aa		2.11	□□□□□ -2.07
MARK3-222	ENST00000560731	INE1	O15225	51 aa		2.1	□□□□□ -2.07
MARK3-222	ENST00000560731	KRTAP21-2	Q3LI59	83 aa		2.06	□□□□□ -2.08
MARK3-222	ENST00000560731	HMCN1	Q96RW7	5635 aa		2.03	□□□□□ -2.08
MARK3-222	ENST00000560731	AHNAK2	Q8IVF2	5795 aa		1.8	□□□□□ -2.12
MARK3-222	ENST00000560731	KRTAP5-10	Q6L8G5	202 aa		1.77	□□□□□ -2.13
MARK3-222	ENST00000560731	PRM1	P04553	51 aa		1.69	□□□□□ -2.14
MARK3-222	ENST00000560731	MUC5AC	P98088	5654 aa		1.68	□□□□□ -2.14
MARK3-222	ENST00000560731	GPR98	Q8WXG9	6306 aa		1.62	□□□□□ -2.15
MARK3-222	ENST00000560731	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.48	□□□□□ -2.17
MARK3-222	ENST00000560731	AHNAK	Q09666	5890 aa	Known RBP	1.39	□□□□□ -2.19
MARK3-222	ENST00000560731	PHGR1	C9JFL3	82 aa		1.3	□□□□□ -2.2
MARK3-222	ENST00000560731	KRTAP21-1	Q3LI58	79 aa		1.07	□□□□□ -2.24
MARK3-222	ENST00000560731	MUC16	Q8WXI7	14507 aa		1.03	□□□□□ -2.25

Retrieved 78 of 20,778 RNA–protein pairs in 150.8 ms