RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-222ENST00000560731 AEBP2Q6ZN18 517 aaPredicted RBP27.12■■□□□ 1.93
MARK3-222ENST00000560731 CHIC1Q5VXU3 224 aa26.11■■□□□ 1.77
MARK3-222ENST00000560731 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
MARK3-222ENST00000560731 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
MARK3-222ENST00000560731 FOXD1Q16676 465 aa21.52■■□□□ 1.04
MARK3-222ENST00000560731 PLPPR3Q6T4P5 718 aa21.03■□□□□ 0.96
MARK3-222ENST00000560731 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
MARK3-222ENST00000560731 ADRA2BP18089 450 aa20.26■□□□□ 0.83
MARK3-222ENST00000560731 PIAS4Q8N2W9 510 aaPredicted RBP20.2■□□□□ 0.82
MARK3-222ENST00000560731 MSH5O43196 834 aa20.14■□□□□ 0.81
MARK3-222ENST00000560731 POTEDQ86YR6 584 aa19.08■□□□□ 0.64
MARK3-222ENST00000560731 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
MARK3-222ENST00000560731 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
MARK3-222ENST00000560731 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
MARK3-222ENST00000560731 PPP4R3CPQ6ZMV5 832 aa18.42■□□□□ 0.54
MARK3-222ENST00000560731 CNKSR2Q8WXI2 1034 aa18.06■□□□□ 0.48
MARK3-222ENST00000560731 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
MARK3-222ENST00000560731 HOXD11P31277 338 aaPredicted RBP17.87■□□□□ 0.45
MARK3-222ENST00000560731 RNF216Q9NWF9 866 aaPredicted RBP17.83■□□□□ 0.44
MARK3-222ENST00000560731 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
MARK3-222ENST00000560731 NPM3O75607 178 aaKnown RBP17.52■□□□□ 0.4
MARK3-222ENST00000560731 NISCHQ9Y2I1 1504 aa17.43■□□□□ 0.38
MARK3-222ENST00000560731 KCNA4P22459 653 aa17.41■□□□□ 0.38
MARK3-222ENST00000560731 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
MARK3-222ENST00000560731 RNF39Q9H2S5 420 aa17.16■□□□□ 0.34
MARK3-222ENST00000560731 CACNB1Q02641 598 aaPredicted RBP17.06■□□□□ 0.32
MARK3-222ENST00000560731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.326e-6■□□□□ 10.1
MARK3-222ENST00000560731 C1QBPQ07021 282 aaKnown RBP16.98■□□□□ 0.31
MARK3-222ENST00000560731 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
MARK3-222ENST00000560731 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
MARK3-222ENST00000560731 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
MARK3-222ENST00000560731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
MARK3-222ENST00000560731 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
MARK3-222ENST00000560731 APLP2Q06481 763 aa16.39■□□□□ 0.21
MARK3-222ENST00000560731 CAPN15O75808 1086 aa16.31■□□□□ 0.2
MARK3-222ENST00000560731 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
MARK3-222ENST00000560731 SAMD1Q6SPF0 538 aaPredicted RBP16.3■□□□□ 0.2
MARK3-222ENST00000560731 SPINK5Q9NQ38 1064 aaPredicted RBP16.29■□□□□ 0.2
MARK3-222ENST00000560731 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
MARK3-222ENST00000560731 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
MARK3-222ENST00000560731 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
MARK3-222ENST00000560731 DSG3P32926 999 aa16.14■□□□□ 0.17
MARK3-222ENST00000560731 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
MARK3-222ENST00000560731 ZBTB22O15209 634 aa15.97■□□□□ 0.15
MARK3-222ENST00000560731 CSRNP3Q8WYN3 585 aa15.94■□□□□ 0.14
MARK3-222ENST00000560731 ABCB7O75027 752 aa15.9■□□□□ 0.14
MARK3-222ENST00000560731 ATXN8OSP0DMR3 200 aa15.77■□□□□ 0.12
MARK3-222ENST00000560731 POLA2Q14181 598 aa15.75■□□□□ 0.11
MARK3-222ENST00000560731 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
MARK3-222ENST00000560731 ZBTB12Q9Y330 459 aaPredicted RBP15.56■□□□□ 0.08
MARK3-222ENST00000560731 RBM42Q9BTD8 480 aaKnown RBP15.49■□□□□ 0.07
MARK3-222ENST00000560731 FBLN2P98095 1184 aa15.26■□□□□ 0.03
MARK3-222ENST00000560731 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
MARK3-222ENST00000560731 AKT1S1Q96B36 256 aa15.17■□□□□ 0.02
MARK3-222ENST00000560731 CCDC180Q9P1Z9 1646 aa15.16■□□□□ 0.02
MARK3-222ENST00000560731 MKRN4PQ13434 485 aaPredicted RBP15.07■□□□□ 0
MARK3-222ENST00000560731 SPDYE2BA6NHP3 402 aa15.06■□□□□ 0
MARK3-222ENST00000560731 SPDYE6P0CI01 402 aa15.06■□□□□ 0
MARK3-222ENST00000560731 SPDYE2Q495Y8 402 aa15.06■□□□□ 0
MARK3-222ENST00000560731 POTEHQ6S545 545 aa15.03■□□□□ -0
MARK3-222ENST00000560731 CHRDL2Q6WN34 429 aa14.97□□□□□ -0.01
MARK3-222ENST00000560731 REM2Q8IYK8 340 aaPredicted RBP14.97□□□□□ -0.01
MARK3-222ENST00000560731 ZNF692Q9BU19 519 aaPredicted RBP14.89□□□□□ -0.03
MARK3-222ENST00000560731 SSUH2Q9Y2M2 353 aa14.85□□□□□ -0.03
MARK3-222ENST00000560731 PITPNM1O00562 1244 aa14.79□□□□□ -0.04
MARK3-222ENST00000560731 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
MARK3-222ENST00000560731 PABPN1Q86U42 306 aaKnown RBP eCLIP14.65□□□□□ -0.06
MARK3-222ENST00000560731 FXR2P51116 673 aaKnown RBP eCLIP14.64□□□□□ -0.07
MARK3-222ENST00000560731 PIP4P2Q8N4L2 257 aa14.64□□□□□ -0.07
MARK3-222ENST00000560731 ZCCHC6Q5VYS8 1495 aaKnown RBP14.62□□□□□ -0.07
MARK3-222ENST00000560731 CLEC11AQ9Y240 323 aa14.61□□□□□ -0.07
MARK3-222ENST00000560731 SPDYE4A6NLX3 237 aa14.56□□□□□ -0.08
MARK3-222ENST00000560731 PRR29P0C7W0 189 aa14.46□□□□□ -0.09
MARK3-222ENST00000560731 DCAF1Q9Y4B6 1507 aa14.45□□□□□ -0.1
MARK3-222ENST00000560731 PRKAR2AP13861 404 aaKnown RBP14.42□□□□□ -0.1
MARK3-222ENST00000560731 STAG3Q9UJ98 1225 aa14.42□□□□□ -0.1
MARK3-222ENST00000560731 DCAF8L2P0C7V8 631 aa14.39□□□□□ -0.11
MARK3-222ENST00000560731 FKBP8Q14318 412 aa14.37□□□□□ -0.11
MARK3-222ENST00000560731 ABCC9O60706 1549 aa14.36□□□□□ -0.11
MARK3-222ENST00000560731 HAX1O00165 279 aa14.33□□□□□ -0.12
MARK3-222ENST00000560731 MYO15BQ96JP2 1530 aa14.31□□□□□ -0.12
MARK3-222ENST00000560731 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
MARK3-222ENST00000560731 PROM2Q8N271 834 aa14.26□□□□□ -0.13
MARK3-222ENST00000560731 SP7Q8TDD2 431 aaPredicted RBP14.24□□□□□ -0.13
MARK3-222ENST00000560731 NACADO15069 1562 aa14.18□□□□□ -0.14
MARK3-222ENST00000560731 C19orf67A6NJJ6 358 aa14.16□□□□□ -0.14
MARK3-222ENST00000560731 FARP1Q9Y4F1 1045 aaPredicted RBP14.16□□□□□ -0.14
MARK3-222ENST00000560731 SHROOM4Q9ULL8 1493 aa14.13□□□□□ -0.15
MARK3-222ENST00000560731 CREBZFQ9NS37 354 aa14.12□□□□□ -0.15
MARK3-222ENST00000560731 EVX2Q03828 476 aa14.08□□□□□ -0.16
MARK3-222ENST00000560731 RB1CC1Q8TDY2 1594 aa14.04□□□□□ -0.16
MARK3-222ENST00000560731 CD44P16070 742 aaKnown RBP13.99□□□□□ -0.17
MARK3-222ENST00000560731 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
MARK3-222ENST00000560731 PLEKHG5O94827 1062 aa13.92□□□□□ -0.18
MARK3-222ENST00000560731 MNX1P50219 401 aaPredicted RBP13.91□□□□□ -0.18
MARK3-222ENST00000560731 AMER1Q5JTC6 1135 aaPredicted RBP13.91□□□□□ -0.18
MARK3-222ENST00000560731 CLCN6P51797 869 aa13.9□□□□□ -0.18
MARK3-222ENST00000560731 SCRIBQ14160 1630 aa13.9□□□□□ -0.19
MARK3-222ENST00000560731 RTN4Q9NQC3 1192 aaKnown RBP13.88□□□□□ -0.19
MARK3-222ENST00000560731 MIER1Q8N108 512 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms