RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
AC087878.1-201ENST00000560709 LCE3AQ5TA76 89 aa4.6□□□□□ -1.67
AC087878.1-201ENST00000560709 KRTAP8-1Q8IUC2 63 aa4.58□□□□□ -1.68
AC087878.1-201ENST00000560709 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
AC087878.1-201ENST00000560709 KRTAP12-3P60328 96 aa4.48□□□□□ -1.69
AC087878.1-201ENST00000560709 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
AC087878.1-201ENST00000560709 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
AC087878.1-201ENST00000560709 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
AC087878.1-201ENST00000560709 MT1EP04732 61 aa4.31□□□□□ -1.72
AC087878.1-201ENST00000560709 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
AC087878.1-201ENST00000560709 KRTAP5-11Q6L8G4 156 aa4.31□□□□□ -1.72
AC087878.1-201ENST00000560709 KMT2DO14686 5537 aa4.31□□□□□ -1.72
AC087878.1-201ENST00000560709 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
AC087878.1-201ENST00000560709 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
AC087878.1-201ENST00000560709 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
AC087878.1-201ENST00000560709 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
AC087878.1-201ENST00000560709 MT1LQ93083 61 aa4.22□□□□□ -1.73
AC087878.1-201ENST00000560709 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
AC087878.1-201ENST00000560709 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
AC087878.1-201ENST00000560709 KRTAP19-3Q7Z4W3 81 aa4.18□□□□□ -1.74
AC087878.1-201ENST00000560709 MT1GP13640 62 aa4.15□□□□□ -1.75
AC087878.1-201ENST00000560709 SYNE2Q8WXH0 6885 aaKnown RBP4.14□□□□□ -1.75
AC087878.1-201ENST00000560709 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
AC087878.1-201ENST00000560709 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
AC087878.1-201ENST00000560709 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
AC087878.1-201ENST00000560709 MT1MQ8N339 61 aa4.06□□□□□ -1.76
AC087878.1-201ENST00000560709 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
AC087878.1-201ENST00000560709 KRTAP4-4Q9BYR3 166 aa4.05□□□□□ -1.76
AC087878.1-201ENST00000560709 SPRR2EP22531 72 aa4.04□□□□□ -1.76
AC087878.1-201ENST00000560709 SPRR2BP35325 72 aa4.04□□□□□ -1.76
AC087878.1-201ENST00000560709 SPRR2AP35326 72 aa4.04□□□□□ -1.76
AC087878.1-201ENST00000560709 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
AC087878.1-201ENST00000560709 MUC12Q9UKN1 5478 aa4.03□□□□□ -1.76
AC087878.1-201ENST00000560709 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
AC087878.1-201ENST00000560709 SPRR2DP22532 72 aa3.9□□□□□ -1.79
AC087878.1-201ENST00000560709 NEBP20929 6669 aa3.87□□□□□ -1.79
AC087878.1-201ENST00000560709 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
AC087878.1-201ENST00000560709 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
AC087878.1-201ENST00000560709 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
AC087878.1-201ENST00000560709 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
AC087878.1-201ENST00000560709 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
AC087878.1-201ENST00000560709 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
AC087878.1-201ENST00000560709 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
AC087878.1-201ENST00000560709 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
AC087878.1-201ENST00000560709 MT1AP04731 61 aa3.62□□□□□ -1.83
AC087878.1-201ENST00000560709 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
AC087878.1-201ENST00000560709 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
AC087878.1-201ENST00000560709 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.83
AC087878.1-201ENST00000560709 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
AC087878.1-201ENST00000560709 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
AC087878.1-201ENST00000560709 INE1O15225 51 aa3.49□□□□□ -1.85
AC087878.1-201ENST00000560709 KRTAP12-4P60329 112 aa3.47□□□□□ -1.85
AC087878.1-201ENST00000560709 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
AC087878.1-201ENST00000560709 MT4P47944 62 aa3.33□□□□□ -1.88
AC087878.1-201ENST00000560709 MT3P25713 68 aa3.3□□□□□ -1.88
AC087878.1-201ENST00000560709 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
AC087878.1-201ENST00000560709 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
AC087878.1-201ENST00000560709 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
AC087878.1-201ENST00000560709 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
AC087878.1-201ENST00000560709 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
AC087878.1-201ENST00000560709 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
AC087878.1-201ENST00000560709 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
AC087878.1-201ENST00000560709 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
AC087878.1-201ENST00000560709 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
AC087878.1-201ENST00000560709 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
AC087878.1-201ENST00000560709 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
AC087878.1-201ENST00000560709 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
AC087878.1-201ENST00000560709 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
AC087878.1-201ENST00000560709 PRM1P04553 51 aa2.67□□□□□ -1.98
AC087878.1-201ENST00000560709 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
AC087878.1-201ENST00000560709 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
AC087878.1-201ENST00000560709 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
AC087878.1-201ENST00000560709 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
AC087878.1-201ENST00000560709 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
AC087878.1-201ENST00000560709 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
AC087878.1-201ENST00000560709 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
AC087878.1-201ENST00000560709 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 189.6 ms