RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 KRTAP19-3Q7Z4W3 81 aa6.67□□□□□ -1.34
RPL28-210ENST00000560583 KTN1-AS1Q86SY8 53 aa6.63□□□□□ -1.35
RPL28-210ENST00000560583 KRTAP4-9Q9BYQ8 210 aa6.6□□□□□ -1.35
RPL28-210ENST00000560583 UQCR11O14957 56 aa6.58□□□□□ -1.36
RPL28-210ENST00000560583 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
RPL28-210ENST00000560583 MIR22HGQ0VDD5 57 aa6.49□□□□□ -1.37
RPL28-210ENST00000560583 TNP1P09430 55 aa6.47□□□□□ -1.37
RPL28-210ENST00000560583 MT1GP13640 62 aa6.46□□□□□ -1.38
RPL28-210ENST00000560583 LCE1DQ5T752 114 aa6.43□□□□□ -1.38
RPL28-210ENST00000560583 C10orf95Q9H7T3 257 aa6.42□□□□□ -1.38
RPL28-210ENST00000560583 MT1MQ8N339 61 aa6.39□□□□□ -1.39
RPL28-210ENST00000560583 HMCN1Q96RW7 5635 aa6.37□□□□□ -1.39
RPL28-210ENST00000560583 PP632Q6XCG6 107 aa6.37□□□□□ -1.39
RPL28-210ENST00000560583 MT1LQ93083 61 aa6.37□□□□□ -1.39
RPL28-210ENST00000560583 LCE3AQ5TA76 89 aa6.34□□□□□ -1.39
RPL28-210ENST00000560583 K7ERS5 55 aa6.32□□□□□ -1.4
RPL28-210ENST00000560583 LCE4AQ5TA78 99 aa6.32□□□□□ -1.4
RPL28-210ENST00000560583 MT4P47944 62 aa6.31□□□□□ -1.4
RPL28-210ENST00000560583 KRTAP4-3Q9BYR4 195 aa6.28□□□□□ -1.4
RPL28-210ENST00000560583 AHNAK2Q8IVF2 5795 aa6.24□□□□□ -1.41
RPL28-210ENST00000560583 KRTAP5-4Q6L8H1 288 aa6.23□□□□□ -1.41
RPL28-210ENST00000560583 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
RPL28-210ENST00000560583 KRTAP4-6Q9BYQ5 205 aa6.14□□□□□ -1.43
RPL28-210ENST00000560583 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
RPL28-210ENST00000560583 KRTAP5-10Q6L8G5 202 aa6.09□□□□□ -1.43
RPL28-210ENST00000560583 PRAC1Q96KF2 57 aa6.09□□□□□ -1.43
RPL28-210ENST00000560583 KRTAP4-7Q9BYR0 210 aa6.07□□□□□ -1.44
RPL28-210ENST00000560583 ROMO1P60602 79 aa5.98□□□□□ -1.45
RPL28-210ENST00000560583 KRTAP5-5Q701N2 237 aaPredicted RBP5.91□□□□□ -1.46
RPL28-210ENST00000560583 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
RPL28-210ENST00000560583 KRTAP20-2Q3LI61 65 aa5.88□□□□□ -1.47
RPL28-210ENST00000560583 KRTAP5-7Q6L8G8 165 aa5.86□□□□□ -1.47
RPL28-210ENST00000560583 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
RPL28-210ENST00000560583 SPRR5A0A1B0GTR4 108 aa5.8□□□□□ -1.48
RPL28-210ENST00000560583 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
RPL28-210ENST00000560583 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
RPL28-210ENST00000560583 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
RPL28-210ENST00000560583 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
RPL28-210ENST00000560583 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
RPL28-210ENST00000560583 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
RPL28-210ENST00000560583 KRTAP5-2Q701N4 177 aa5.43□□□□□ -1.54
RPL28-210ENST00000560583 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
RPL28-210ENST00000560583 MT1AP04731 61 aa5.4□□□□□ -1.54
RPL28-210ENST00000560583 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.54
RPL28-210ENST00000560583 H3BS24 57 aa5.28□□□□□ -1.56
RPL28-210ENST00000560583 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
RPL28-210ENST00000560583 KRTAP5-8O75690 187 aa5.25□□□□□ -1.57
RPL28-210ENST00000560583 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
RPL28-210ENST00000560583 KRTAP6-2Q3LI66 62 aa5.19□□□□□ -1.58
RPL28-210ENST00000560583 AHNAKQ09666 5890 aaKnown RBP5.19□□□□□ -1.58
RPL28-210ENST00000560583 MUC5ACP98088 5654 aa5.18□□□□□ -1.58
RPL28-210ENST00000560583 OBSCNQ5VST9 7968 aa5.16□□□□□ -1.58
RPL28-210ENST00000560583 MUC5BQ9HC84 5762 aaPredicted RBP5.14□□□□□ -1.59
RPL28-210ENST00000560583 NDUFAF8A1L188 74 aa5.12□□□□□ -1.59
RPL28-210ENST00000560583 LUZP6Q538Z0 58 aa5.01□□□□□ -1.61
RPL28-210ENST00000560583 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
RPL28-210ENST00000560583 MT3P25713 68 aa4.91□□□□□ -1.62
RPL28-210ENST00000560583 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
RPL28-210ENST00000560583 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
RPL28-210ENST00000560583 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
RPL28-210ENST00000560583 INE1O15225 51 aa4.45□□□□□ -1.7
RPL28-210ENST00000560583 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
RPL28-210ENST00000560583 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
RPL28-210ENST00000560583 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
RPL28-210ENST00000560583 LCE1CQ5T751 118 aa4.25□□□□□ -1.73
RPL28-210ENST00000560583 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
RPL28-210ENST00000560583 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
RPL28-210ENST00000560583 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
RPL28-210ENST00000560583 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
RPL28-210ENST00000560583 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
RPL28-210ENST00000560583 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
RPL28-210ENST00000560583 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
RPL28-210ENST00000560583 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
RPL28-210ENST00000560583 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
RPL28-210ENST00000560583 PRM1P04553 51 aa3.08□□□□□ -1.92
RPL28-210ENST00000560583 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
RPL28-210ENST00000560583 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 105 ms