RNA–Protein interactions for RNA: ENST00000560494.1

SLTM-222, Transcript of SAFB like transcription modulator, human

TSL 3

Gene SLTM, Length 674 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-222	ENST00000560494	KRTAP10-7	P60409	375 aa	Predicted RBP	5	□□□□□ -1.61
SLTM-222	ENST00000560494	KRTAP19-6	Q3LI70	58 aa		4.99	□□□□□ -1.61
SLTM-222	ENST00000560494	KRTAP2-2	Q9BYT5	123 aa		4.99	□□□□□ -1.61
SLTM-222	ENST00000560494	MT3	P25713	68 aa		4.98	□□□□□ -1.61
SLTM-222	ENST00000560494	KRTAP12-3	P60328	96 aa		4.95	□□□□□ -1.62
SLTM-222	ENST00000560494	LUZP6	Q538Z0	58 aa		4.92	□□□□□ -1.62
SLTM-222	ENST00000560494	USH2A	O75445	5202 aa		4.87	□□□□□ -1.63
SLTM-222	ENST00000560494	SPRR5	A0A1B0GTR4	108 aa		4.85	□□□□□ -1.63
SLTM-222	ENST00000560494	SSPO	A2VEC9	5147 aa		4.79	□□□□□ -1.64
SLTM-222	ENST00000560494	KRTAP19-5	Q3LI72	72 aa		4.78	□□□□□ -1.64
SLTM-222	ENST00000560494	NDUFAF8	A1L188	74 aa		4.74	□□□□□ -1.65
SLTM-222	ENST00000560494	KRTAP19-7	Q3SYF9	63 aa		4.67	□□□□□ -1.66
SLTM-222	ENST00000560494	LCE3C	Q5T5A8	94 aa		4.64	□□□□□ -1.67
SLTM-222	ENST00000560494	MT1E	P04732	61 aa		4.62	□□□□□ -1.67
SLTM-222	ENST00000560494	MT1L	Q93083	61 aa		4.55	□□□□□ -1.68
SLTM-222	ENST00000560494	CRCT1	Q9UGL9	99 aa		4.54	□□□□□ -1.68
SLTM-222	ENST00000560494	FSIP2	Q5CZC0	6907 aa		4.52	□□□□□ -1.69
SLTM-222	ENST00000560494	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.48	□□□□□ -1.69
SLTM-222	ENST00000560494	LCE1F	Q5T754	118 aa		4.48	□□□□□ -1.69
SLTM-222	ENST00000560494	MT1G	P13640	62 aa		4.46	□□□□□ -1.7
SLTM-222	ENST00000560494	KRTAP19-3	Q7Z4W3	81 aa		4.44	□□□□□ -1.7
SLTM-222	ENST00000560494	KMT2D	O14686	5537 aa		4.43	□□□□□ -1.7
SLTM-222	ENST00000560494	LCE1E	Q5T753	118 aa		4.42	□□□□□ -1.7
SLTM-222	ENST00000560494	SPRR2F	Q96RM1	72 aa		4.4	□□□□□ -1.71
SLTM-222	ENST00000560494	KRTAP5-9	P26371	169 aa		4.35	□□□□□ -1.71
SLTM-222	ENST00000560494	MT1M	Q8N339	61 aa		4.33	□□□□□ -1.72
SLTM-222	ENST00000560494	MACF1	Q9UPN3	7388 aa	Known RBP	4.32	□□□□□ -1.72
SLTM-222	ENST00000560494	KRTAP5-11	Q6L8G4	156 aa		4.3	□□□□□ -1.72
SLTM-222	ENST00000560494	KRTAP9-6	A8MVA2	160 aa		4.23	□□□□□ -1.73
SLTM-222	ENST00000560494	KRTAP6-3	Q3LI67	103 aa		4.22	□□□□□ -1.73
SLTM-222	ENST00000560494	SPRR2E	P22531	72 aa		4.16	□□□□□ -1.74
SLTM-222	ENST00000560494	SPRR2B	P35325	72 aa		4.16	□□□□□ -1.74
SLTM-222	ENST00000560494	SPRR2A	P35326	72 aa		4.16	□□□□□ -1.74
SLTM-222	ENST00000560494	KRTAP2-3	P0C7H8	128 aa		4.12	□□□□□ -1.75
SLTM-222	ENST00000560494	KRTAP2-4	Q9BYR9	128 aa		4.12	□□□□□ -1.75
SLTM-222	ENST00000560494	KRTAP2-1	Q9BYU5	128 aa		4.12	□□□□□ -1.75
SLTM-222	ENST00000560494	INE1	O15225	51 aa		4.11	□□□□□ -1.75
SLTM-222	ENST00000560494	KRTAP4-3	Q9BYR4	195 aa		4.1	□□□□□ -1.75
SLTM-222	ENST00000560494	MUC12	Q9UKN1	5478 aa		4.1	□□□□□ -1.75
SLTM-222	ENST00000560494	SYNE2	Q8WXH0	6885 aa	Known RBP	4.09	□□□□□ -1.76
SLTM-222	ENST00000560494	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.08	□□□□□ -1.76
SLTM-222	ENST00000560494	SPRR2D	P22532	72 aa		4.02	□□□□□ -1.77
SLTM-222	ENST00000560494	MT1A	P04731	61 aa		3.92	□□□□□ -1.78
SLTM-222	ENST00000560494	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.89	□□□□□ -1.79
SLTM-222	ENST00000560494	MDN1	Q9NU22	5596 aa		3.89	□□□□□ -1.79
SLTM-222	ENST00000560494	LCE3E	Q5T5B0	92 aa		3.84	□□□□□ -1.79
SLTM-222	ENST00000560494	DST	Q03001	7570 aa	Known RBP	3.8	□□□□□ -1.8
SLTM-222	ENST00000560494	NEB	P20929	6669 aa		3.78	□□□□□ -1.8
SLTM-222	ENST00000560494	KRTAP6-1	Q3LI64	71 aa		3.77	□□□□□ -1.81
SLTM-222	ENST00000560494	KRTAP12-4	P60329	112 aa		3.68	□□□□□ -1.82
SLTM-222	ENST00000560494	KRTAP5-4	Q6L8H1	288 aa		3.67	□□□□□ -1.82
SLTM-222	ENST00000560494	KRTAP5-1	Q6L8H4	278 aa		3.6	□□□□□ -1.83
SLTM-222	ENST00000560494	KRTAP20-1	Q3LI63	56 aa		3.53	□□□□□ -1.84
SLTM-222	ENST00000560494	LCE3D	Q9BYE3	92 aa		3.53	□□□□□ -1.84
SLTM-222	ENST00000560494	SYNE1	Q8NF91	8797 aa	Known RBP	3.49	□□□□□ -1.85
SLTM-222	ENST00000560494	KRTAP6-2	Q3LI66	62 aa		3.47	□□□□□ -1.85
SLTM-222	ENST00000560494	MT4	P47944	62 aa		3.4	□□□□□ -1.87
SLTM-222	ENST00000560494	KRTAP20-2	Q3LI61	65 aa		3.4	□□□□□ -1.87
SLTM-222	ENST00000560494	KRTAP4-4	Q9BYR3	166 aa		3.39	□□□□□ -1.87
SLTM-222	ENST00000560494	KRTAP5-2	Q701N4	177 aa		3.36	□□□□□ -1.87
SLTM-222	ENST00000560494	HMCN1	Q96RW7	5635 aa		3.19	□□□□□ -1.9
SLTM-222	ENST00000560494	OBSCN	Q5VST9	7968 aa		3.16	□□□□□ -1.9
SLTM-222	ENST00000560494	PRM1	P04553	51 aa		3.03	□□□□□ -1.92
SLTM-222	ENST00000560494	LCE1C	Q5T751	118 aa		2.94	□□□□□ -1.94
SLTM-222	ENST00000560494	LCE1B	Q5T7P3	118 aa		2.94	□□□□□ -1.94
SLTM-222	ENST00000560494	KRTAP5-10	Q6L8G5	202 aa		2.85	□□□□□ -1.95
SLTM-222	ENST00000560494	KRTAP5-8	O75690	187 aa		2.82	□□□□□ -1.96
SLTM-222	ENST00000560494	GPR98	Q8WXG9	6306 aa		2.82	□□□□□ -1.96
SLTM-222	ENST00000560494	KRTAP5-7	Q6L8G8	165 aa		2.81	□□□□□ -1.96
SLTM-222	ENST00000560494	AHNAK2	Q8IVF2	5795 aa		2.78	□□□□□ -1.96
SLTM-222	ENST00000560494	MUC5AC	P98088	5654 aa		2.72	□□□□□ -1.97
SLTM-222	ENST00000560494	KRTAP21-2	Q3LI59	83 aa		2.47	□□□□□ -2.01
SLTM-222	ENST00000560494	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.36	□□□□□ -2.03
SLTM-222	ENST00000560494	MUC19	Q7Z5P9	8384 aa		2.35	□□□□□ -2.03
SLTM-222	ENST00000560494	AHNAK	Q09666	5890 aa	Known RBP	2.18	□□□□□ -2.06
SLTM-222	ENST00000560494	PHGR1	C9JFL3	82 aa		2.12	□□□□□ -2.07
SLTM-222	ENST00000560494	KRTAP21-1	Q3LI58	79 aa		1.92	□□□□□ -2.1
SLTM-222	ENST00000560494	MUC16	Q8WXI7	14507 aa		1.39	□□□□□ -2.19

Retrieved 78 of 20,778 RNA–protein pairs in 101.7 ms