RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 KRTAP8-1Q8IUC2 63 aa4.14□□□□□ -1.75
SNRPA1-211ENST00000560433 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
SNRPA1-211ENST00000560433 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
SNRPA1-211ENST00000560433 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
SNRPA1-211ENST00000560433 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
SNRPA1-211ENST00000560433 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
SNRPA1-211ENST00000560433 MACF1Q9UPN3 7388 aaKnown RBP4.1□□□□□ -1.75
SNRPA1-211ENST00000560433 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
SNRPA1-211ENST00000560433 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
SNRPA1-211ENST00000560433 KRTAP9-7A8MTY7 169 aa4.01□□□□□ -1.77
SNRPA1-211ENST00000560433 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
SNRPA1-211ENST00000560433 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
SNRPA1-211ENST00000560433 MT1EP04732 61 aa3.91□□□□□ -1.78
SNRPA1-211ENST00000560433 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.79
SNRPA1-211ENST00000560433 SPRR2FQ96RM1 72 aa3.85□□□□□ -1.79
SNRPA1-211ENST00000560433 MT1LQ93083 61 aa3.85□□□□□ -1.79
SNRPA1-211ENST00000560433 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.79
SNRPA1-211ENST00000560433 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.8
SNRPA1-211ENST00000560433 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
SNRPA1-211ENST00000560433 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
SNRPA1-211ENST00000560433 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
SNRPA1-211ENST00000560433 KRTAP5-9P26371 169 aa3.78□□□□□ -1.81
SNRPA1-211ENST00000560433 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
SNRPA1-211ENST00000560433 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
SNRPA1-211ENST00000560433 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
SNRPA1-211ENST00000560433 MT1MQ8N339 61 aa3.69□□□□□ -1.82
SNRPA1-211ENST00000560433 MT1GP13640 62 aa3.68□□□□□ -1.82
SNRPA1-211ENST00000560433 NEBP20929 6669 aa3.67□□□□□ -1.82
SNRPA1-211ENST00000560433 LCE5AQ5TCM9 118 aa3.66□□□□□ -1.82
SNRPA1-211ENST00000560433 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
SNRPA1-211ENST00000560433 SPRR2EP22531 72 aa3.61□□□□□ -1.83
SNRPA1-211ENST00000560433 SPRR2BP35325 72 aa3.61□□□□□ -1.83
SNRPA1-211ENST00000560433 SPRR2AP35326 72 aa3.61□□□□□ -1.83
SNRPA1-211ENST00000560433 INE1O15225 51 aa3.6□□□□□ -1.83
SNRPA1-211ENST00000560433 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
SNRPA1-211ENST00000560433 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
SNRPA1-211ENST00000560433 SPRR2DP22532 72 aa3.49□□□□□ -1.85
SNRPA1-211ENST00000560433 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
SNRPA1-211ENST00000560433 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
SNRPA1-211ENST00000560433 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
SNRPA1-211ENST00000560433 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
SNRPA1-211ENST00000560433 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
SNRPA1-211ENST00000560433 KRTAP2-1Q9BYU5 128 aa3.39□□□□□ -1.87
SNRPA1-211ENST00000560433 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
SNRPA1-211ENST00000560433 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
SNRPA1-211ENST00000560433 MT1AP04731 61 aa3.22□□□□□ -1.89
SNRPA1-211ENST00000560433 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
SNRPA1-211ENST00000560433 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
SNRPA1-211ENST00000560433 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
SNRPA1-211ENST00000560433 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
SNRPA1-211ENST00000560433 MT4P47944 62 aa3.09□□□□□ -1.91
SNRPA1-211ENST00000560433 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
SNRPA1-211ENST00000560433 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
SNRPA1-211ENST00000560433 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
SNRPA1-211ENST00000560433 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
SNRPA1-211ENST00000560433 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
SNRPA1-211ENST00000560433 MT3P25713 68 aa2.92□□□□□ -1.94
SNRPA1-211ENST00000560433 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
SNRPA1-211ENST00000560433 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
SNRPA1-211ENST00000560433 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
SNRPA1-211ENST00000560433 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
SNRPA1-211ENST00000560433 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
SNRPA1-211ENST00000560433 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
SNRPA1-211ENST00000560433 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
SNRPA1-211ENST00000560433 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
SNRPA1-211ENST00000560433 PRM1P04553 51 aa2.54□□□□□ -2
SNRPA1-211ENST00000560433 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
SNRPA1-211ENST00000560433 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
SNRPA1-211ENST00000560433 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
SNRPA1-211ENST00000560433 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
SNRPA1-211ENST00000560433 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
SNRPA1-211ENST00000560433 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
SNRPA1-211ENST00000560433 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
SNRPA1-211ENST00000560433 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
SNRPA1-211ENST00000560433 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
SNRPA1-211ENST00000560433 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
SNRPA1-211ENST00000560433 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
SNRPA1-211ENST00000560433 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 77.8 ms