RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 MT1AP04731 61 aa1.2□□□□□ -2.22
HMGB3P26-201ENST00000560051 KRTAP4-1Q9BYQ7 146 aa1.19□□□□□ -2.22
HMGB3P26-201ENST00000560051 LPAP08519 4548 aa1.18□□□□□ -2.22
HMGB3P26-201ENST00000560051 TENM1Q9UKZ4 2725 aa1.17□□□□□ -2.22
HMGB3P26-201ENST00000560051 DYNC1H1Q14204 4646 aaKnown RBP1.17□□□□□ -2.22
HMGB3P26-201ENST00000560051 FCGBPQ9Y6R7 5405 aaPredicted RBP1.16□□□□□ -2.22
HMGB3P26-201ENST00000560051 KRTAP19-5Q3LI72 72 aa1.15□□□□□ -2.23
HMGB3P26-201ENST00000560051 SPRR2BP35325 72 aa1.14□□□□□ -2.23
HMGB3P26-201ENST00000560051 MUC17Q685J3 4493 aa1.13□□□□□ -2.23
HMGB3P26-201ENST00000560051 SPRR2DP22532 72 aa1.12□□□□□ -2.23
HMGB3P26-201ENST00000560051 KRTAP19-3Q7Z4W3 81 aa1.12□□□□□ -2.23
HMGB3P26-201ENST00000560051 HMCN1Q96RW7 5635 aa1.11□□□□□ -2.23
HMGB3P26-201ENST00000560051 SYNE1Q8NF91 8797 aaKnown RBP1.11□□□□□ -2.23
HMGB3P26-201ENST00000560051 SPRR2AP35326 72 aa1.11□□□□□ -2.23
HMGB3P26-201ENST00000560051 FAT1Q14517 4588 aa1.1□□□□□ -2.23
HMGB3P26-201ENST00000560051 LRP1BQ9NZR2 4599 aa1.06□□□□□ -2.24
HMGB3P26-201ENST00000560051 STARD9Q9P2P6 4700 aa1.04□□□□□ -2.24
HMGB3P26-201ENST00000560051 HYDINQ4G0P3 5121 aa1.02□□□□□ -2.25
HMGB3P26-201ENST00000560051 SPRR2FQ96RM1 72 aa1.02□□□□□ -2.25
HMGB3P26-201ENST00000560051 MT1EP04732 61 aa1.01□□□□□ -2.25
HMGB3P26-201ENST00000560051 KRTAP6-2Q3LI66 62 aa1□□□□□ -2.25
HMGB3P26-201ENST00000560051 SPRR2GQ9BYE4 73 aa1□□□□□ -2.25
HMGB3P26-201ENST00000560051 SPRR2EP22531 72 aa0.98□□□□□ -2.25
HMGB3P26-201ENST00000560051 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
HMGB3P26-201ENST00000560051 MT1LQ93083 61 aa0.97□□□□□ -2.25
HMGB3P26-201ENST00000560051 HERC1Q15751 4861 aa0.97□□□□□ -2.25
HMGB3P26-201ENST00000560051 MT1HL1P0DM35 61 aa0.96□□□□□ -2.26
HMGB3P26-201ENST00000560051 KRTAP19-2Q3LHN2 52 aa0.96□□□□□ -2.26
HMGB3P26-201ENST00000560051 DNHD1Q96M86 4753 aa0.94□□□□□ -2.26
HMGB3P26-201ENST00000560051 LRP2P98164 4655 aa0.94□□□□□ -2.26
HMGB3P26-201ENST00000560051 MT1HP80294 61 aa0.93□□□□□ -2.26
HMGB3P26-201ENST00000560051 RYR2Q92736 4967 aa0.92□□□□□ -2.26
HMGB3P26-201ENST00000560051 RYR1P21817 5038 aa0.88□□□□□ -2.27
HMGB3P26-201ENST00000560051 RYR3Q15413 4870 aa0.87□□□□□ -2.27
HMGB3P26-201ENST00000560051 KMT2CQ8NEZ4 4911 aaKnown RBP0.86□□□□□ -2.27
HMGB3P26-201ENST00000560051 KRTAP19-8Q3LI54 63 aa0.85□□□□□ -2.27
HMGB3P26-201ENST00000560051 KIAA1109Q2LD37 5005 aa0.83□□□□□ -2.28
HMGB3P26-201ENST00000560051 EPPK1P58107 5090 aaKnown RBP0.83□□□□□ -2.28
HMGB3P26-201ENST00000560051 ABCA13Q86UQ4 5058 aa0.83□□□□□ -2.28
HMGB3P26-201ENST00000560051 MT1XP80297 61 aa0.81□□□□□ -2.28
HMGB3P26-201ENST00000560051 BIRC6Q9NR09 4857 aa0.8□□□□□ -2.28
HMGB3P26-201ENST00000560051 MT2AP02795 61 aa0.79□□□□□ -2.28
HMGB3P26-201ENST00000560051 MT1FP04733 61 aa0.79□□□□□ -2.28
HMGB3P26-201ENST00000560051 MT1BP07438 61 aa0.79□□□□□ -2.28
HMGB3P26-201ENST00000560051 PCLOQ9Y6V0 5065 aa0.78□□□□□ -2.28
HMGB3P26-201ENST00000560051 HERC2O95714 4834 aa0.77□□□□□ -2.29
HMGB3P26-201ENST00000560051 HMCN2Q8NDA2 5059 aa0.75□□□□□ -2.29
HMGB3P26-201ENST00000560051 MDN1Q9NU22 5596 aa0.74□□□□□ -2.29
HMGB3P26-201ENST00000560051 USH2AO75445 5202 aa0.73□□□□□ -2.29
HMGB3P26-201ENST00000560051 MUC2Q02817 5179 aa0.73□□□□□ -2.29
HMGB3P26-201ENST00000560051 FAT4Q6V0I7 4981 aa0.71□□□□□ -2.3
HMGB3P26-201ENST00000560051 KRTAP19-7Q3SYF9 63 aa0.71□□□□□ -2.3
HMGB3P26-201ENST00000560051 UBR4Q5T4S7 5183 aa0.71□□□□□ -2.3
HMGB3P26-201ENST00000560051 KRTAP5-10Q6L8G5 202 aa0.7□□□□□ -2.3
HMGB3P26-201ENST00000560051 RNF213Q63HN8 5207 aa0.69□□□□□ -2.3
HMGB3P26-201ENST00000560051 AHNAK2Q8IVF2 5795 aa0.69□□□□□ -2.3
HMGB3P26-201ENST00000560051 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
HMGB3P26-201ENST00000560051 MT1MQ8N339 61 aa0.68□□□□□ -2.3
HMGB3P26-201ENST00000560051 SSPOA2VEC9 5147 aa0.67□□□□□ -2.3
HMGB3P26-201ENST00000560051 MT1GP13640 62 aa0.67□□□□□ -2.3
HMGB3P26-201ENST00000560051 KRTAP19-6Q3LI70 58 aa0.64□□□□□ -2.31
HMGB3P26-201ENST00000560051 MUC5ACP98088 5654 aa0.6□□□□□ -2.31
HMGB3P26-201ENST00000560051 KMT2DO14686 5537 aa0.59□□□□□ -2.31
HMGB3P26-201ENST00000560051 KRTAP6-1Q3LI64 71 aa0.58□□□□□ -2.32
HMGB3P26-201ENST00000560051 MACF1Q9UPN3 7388 aaKnown RBP0.55□□□□□ -2.32
HMGB3P26-201ENST00000560051 SYNE2Q8WXH0 6885 aaKnown RBP0.55□□□□□ -2.32
HMGB3P26-201ENST00000560051 GPR98Q8WXG9 6306 aa0.54□□□□□ -2.32
HMGB3P26-201ENST00000560051 FSIP2Q5CZC0 6907 aa0.53□□□□□ -2.33
HMGB3P26-201ENST00000560051 DSTQ03001 7570 aaKnown RBP0.5□□□□□ -2.33
HMGB3P26-201ENST00000560051 MUC12Q9UKN1 5478 aa0.5□□□□□ -2.33
HMGB3P26-201ENST00000560051 NEBP20929 6669 aa0.47□□□□□ -2.33
HMGB3P26-201ENST00000560051 MUC5BQ9HC84 5762 aaPredicted RBP0.45□□□□□ -2.34
HMGB3P26-201ENST00000560051 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
HMGB3P26-201ENST00000560051 KRTAP20-2Q3LI61 65 aa0.43□□□□□ -2.34
HMGB3P26-201ENST00000560051 AHNAKQ09666 5890 aaKnown RBP0.41□□□□□ -2.34
HMGB3P26-201ENST00000560051 MT4P47944 62 aa0.4□□□□□ -2.35
HMGB3P26-201ENST00000560051 KRTAP20-1Q3LI63 56 aa0.4□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 109.9 ms