RNA–Protein interactions for RNA: ENST00000559757.1

RNF111-208, Transcript of ring finger protein 111, human

TSL 4

Gene RNF111, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF111-208	ENST00000559757	PP632	Q6XCG6	107 aa		6.12	□□□□□ -1.43
RNF111-208	ENST00000559757		K7ERS5	55 aa		6.1	□□□□□ -1.43
RNF111-208	ENST00000559757	PSPHP1	O15172	72 aa		6.08	□□□□□ -1.44
RNF111-208	ENST00000559757	MT1L	Q93083	61 aa		6.05	□□□□□ -1.44
RNF111-208	ENST00000559757	MT1M	Q8N339	61 aa		6	□□□□□ -1.45
RNF111-208	ENST00000559757	KRTAP25-1	Q3LHN0	102 aa		5.99	□□□□□ -1.45
RNF111-208	ENST00000559757		H3BS24	57 aa		5.98	□□□□□ -1.45
RNF111-208	ENST00000559757	KRTAP12-3	P60328	96 aa		5.94	□□□□□ -1.46
RNF111-208	ENST00000559757		A6NED7	52 aa		5.93	□□□□□ -1.46
RNF111-208	ENST00000559757	RPS28	P62857	69 aa	Known RBP	5.89	□□□□□ -1.47
RNF111-208	ENST00000559757	KRTAP4-3	Q9BYR4	195 aa		5.8	□□□□□ -1.48
RNF111-208	ENST00000559757	KRTAP4-9	Q9BYQ8	210 aa		5.79	□□□□□ -1.48
RNF111-208	ENST00000559757	KRTAP23-1	A1A580	65 aa		5.78	□□□□□ -1.48
RNF111-208	ENST00000559757	LCE4A	Q5TA78	99 aa		5.78	□□□□□ -1.48
RNF111-208	ENST00000559757	CDC42SE1	Q9NRR8	79 aa		5.76	□□□□□ -1.49
RNF111-208	ENST00000559757	LCE1D	Q5T752	114 aa		5.7	□□□□□ -1.5
RNF111-208	ENST00000559757	KRTAP4-7	Q9BYR0	210 aa		5.7	□□□□□ -1.5
RNF111-208	ENST00000559757	KRTAP19-4	Q3LI73	84 aa		5.69	□□□□□ -1.5
RNF111-208	ENST00000559757	KRTAP5-4	Q6L8H1	288 aa		5.66	□□□□□ -1.5
RNF111-208	ENST00000559757	MT4	P47944	62 aa		5.65	□□□□□ -1.5
RNF111-208	ENST00000559757	ROMO1	P60602	79 aa		5.65	□□□□□ -1.5
RNF111-208	ENST00000559757	HMCN1	Q96RW7	5635 aa		5.61	□□□□□ -1.51
RNF111-208	ENST00000559757	LOC100996750	A0A140TA64	210 aa		5.6	□□□□□ -1.51
RNF111-208	ENST00000559757	KRTAP15-1	Q3LI76	137 aa		5.6	□□□□□ -1.51
RNF111-208	ENST00000559757	KRTAP4-6	Q9BYQ5	205 aa		5.6	□□□□□ -1.51
RNF111-208	ENST00000559757	GPR98	Q8WXG9	6306 aa		5.57	□□□□□ -1.52
RNF111-208	ENST00000559757	LCE3C	Q5T5A8	94 aa		5.48	□□□□□ -1.53
RNF111-208	ENST00000559757	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.48	□□□□□ -1.53
RNF111-208	ENST00000559757	KRTAP12-4	P60329	112 aa		5.37	□□□□□ -1.55
RNF111-208	ENST00000559757	SPRR5	A0A1B0GTR4	108 aa		5.35	□□□□□ -1.55
RNF111-208	ENST00000559757	AHNAK2	Q8IVF2	5795 aa		5.34	□□□□□ -1.55
RNF111-208	ENST00000559757	KRTAP20-2	Q3LI61	65 aa		5.33	□□□□□ -1.56
RNF111-208	ENST00000559757	SYNE1	Q8NF91	8797 aa	Known RBP	5.27	□□□□□ -1.57
RNF111-208	ENST00000559757	KRTAP5-10	Q6L8G5	202 aa		5.24	□□□□□ -1.57
RNF111-208	ENST00000559757	BRK1	Q8WUW1	75 aa		5.21	□□□□□ -1.58
RNF111-208	ENST00000559757	KRTAP4-12	Q9BQ66	201 aa		5.2	□□□□□ -1.58
RNF111-208	ENST00000559757	MT1A	P04731	61 aa		5.16	□□□□□ -1.58
RNF111-208	ENST00000559757	KRTAP5-3	Q6L8H2	238 aa		5.16	□□□□□ -1.58
RNF111-208	ENST00000559757	KRTAP9-6	A8MVA2	160 aa		5.1	□□□□□ -1.59
RNF111-208	ENST00000559757	KRTAP6-1	Q3LI64	71 aa		5.09	□□□□□ -1.59
RNF111-208	ENST00000559757	KRTAP5-7	Q6L8G8	165 aa		5.03	□□□□□ -1.6
RNF111-208	ENST00000559757	KRTAP5-2	Q701N4	177 aa		4.98	□□□□□ -1.61
RNF111-208	ENST00000559757	KRTAP9-4	Q9BYQ2	154 aa		4.97	□□□□□ -1.61
RNF111-208	ENST00000559757	KRTAP9-9	Q9BYP9	154 aa		4.94	□□□□□ -1.62
RNF111-208	ENST00000559757	PMAIP1	Q13794	54 aa		4.88	□□□□□ -1.63
RNF111-208	ENST00000559757	KRTAP6-2	Q3LI66	62 aa		4.85	□□□□□ -1.63
RNF111-208	ENST00000559757	KRTAP4-11	Q9BYQ6	195 aa		4.84	□□□□□ -1.63
RNF111-208	ENST00000559757	PRO0628	Q9UI54	55 aa		4.82	□□□□□ -1.64
RNF111-208	ENST00000559757	MT3	P25713	68 aa		4.74	□□□□□ -1.65
RNF111-208	ENST00000559757	OBSCN	Q5VST9	7968 aa		4.7	□□□□□ -1.66
RNF111-208	ENST00000559757	PRAC1	Q96KF2	57 aa		4.69	□□□□□ -1.66
RNF111-208	ENST00000559757	KRTAP5-8	O75690	187 aa		4.67	□□□□□ -1.66
RNF111-208	ENST00000559757	SVIP	Q8NHG7	77 aa		4.63	□□□□□ -1.67
RNF111-208	ENST00000559757	KTN1-AS1	Q86SY8	53 aa		4.56	□□□□□ -1.68
RNF111-208	ENST00000559757	KRTAP5-1	Q6L8H4	278 aa		4.43	□□□□□ -1.7
RNF111-208	ENST00000559757	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.39	□□□□□ -1.71
RNF111-208	ENST00000559757	KRTAP4-2	Q9BYR5	136 aa		4.39	□□□□□ -1.71
RNF111-208	ENST00000559757	MUC5AC	P98088	5654 aa		4.37	□□□□□ -1.71
RNF111-208	ENST00000559757	AHNAK	Q09666	5890 aa	Known RBP	4.36	□□□□□ -1.71
RNF111-208	ENST00000559757	LCE1E	Q5T753	118 aa		4.33	□□□□□ -1.72
RNF111-208	ENST00000559757		A0A0A0MQY5	61 aa		4.15	□□□□□ -1.75
RNF111-208	ENST00000559757	LCE1B	Q5T7P3	118 aa		4.03	□□□□□ -1.76
RNF111-208	ENST00000559757	LUZP6	Q538Z0	58 aa		4.01	□□□□□ -1.77
RNF111-208	ENST00000559757	LCE1C	Q5T751	118 aa		4.01	□□□□□ -1.77
RNF111-208	ENST00000559757	LCE3D	Q9BYE3	92 aa		3.98	□□□□□ -1.77
RNF111-208	ENST00000559757	LCE3E	Q5T5B0	92 aa		3.77	□□□□□ -1.81
RNF111-208	ENST00000559757	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.67	□□□□□ -1.82
RNF111-208	ENST00000559757	KRTAP5-11	Q6L8G4	156 aa		3.62	□□□□□ -1.83
RNF111-208	ENST00000559757	LCE1F	Q5T754	118 aa		3.52	□□□□□ -1.85
RNF111-208	ENST00000559757	NDUFAF8	A1L188	74 aa		3.47	□□□□□ -1.85
RNF111-208	ENST00000559757	KRTAP21-2	Q3LI59	83 aa		3.35	□□□□□ -1.87
RNF111-208	ENST00000559757	PHGR1	C9JFL3	82 aa		3.11	□□□□□ -1.91
RNF111-208	ENST00000559757	KRTAP4-4	Q9BYR3	166 aa		3.02	□□□□□ -1.93
RNF111-208	ENST00000559757	MUC19	Q7Z5P9	8384 aa		2.88	□□□□□ -1.95
RNF111-208	ENST00000559757	PRM1	P04553	51 aa		2.87	□□□□□ -1.95
RNF111-208	ENST00000559757	INE1	O15225	51 aa		2.78	□□□□□ -1.96
RNF111-208	ENST00000559757	KRTAP21-1	Q3LI58	79 aa		2.34	□□□□□ -2.03
RNF111-208	ENST00000559757	MUC16	Q8WXI7	14507 aa		1.98	□□□□□ -2.09

Retrieved 78 of 20,778 RNA–protein pairs in 71.7 ms