RNA–Protein interactions for RNA: ENST00000559742.5

PDE8A-211, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-211ENST00000559742 MT1EP04732 61 aa6.52□□□□□ -1.37
PDE8A-211ENST00000559742 MUC12Q9UKN1 5478 aa6.5□□□□□ -1.37
PDE8A-211ENST00000559742 MT1LQ93083 61 aa6.48□□□□□ -1.37
PDE8A-211ENST00000559742 KRTAP9-2Q9BYQ4 174 aa6.43□□□□□ -1.38
PDE8A-211ENST00000559742 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
PDE8A-211ENST00000559742 KRTAP4-3Q9BYR4 195 aa6.29□□□□□ -1.4
PDE8A-211ENST00000559742 MACF1Q9UPN3 7388 aaKnown RBP6.28□□□□□ -1.4
PDE8A-211ENST00000559742 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.42
PDE8A-211ENST00000559742 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.42
PDE8A-211ENST00000559742 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
PDE8A-211ENST00000559742 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
PDE8A-211ENST00000559742 MT1GP13640 62 aa6.13□□□□□ -1.43
PDE8A-211ENST00000559742 KRTAP19-3Q7Z4W3 81 aa6.13□□□□□ -1.43
PDE8A-211ENST00000559742 SPRR2FQ96RM1 72 aa6.12□□□□□ -1.43
PDE8A-211ENST00000559742 MT1MQ8N339 61 aa6.11□□□□□ -1.43
PDE8A-211ENST00000559742 MDN1Q9NU22 5596 aa6□□□□□ -1.45
PDE8A-211ENST00000559742 KRTAP12-4P60329 112 aa5.97□□□□□ -1.45
PDE8A-211ENST00000559742 LCE5AQ5TCM9 118 aa5.94□□□□□ -1.46
PDE8A-211ENST00000559742 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
PDE8A-211ENST00000559742 KRTAP9-6A0A140TA67 174 aa5.78□□□□□ -1.48
PDE8A-211ENST00000559742 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
PDE8A-211ENST00000559742 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.74□□□□□ -1.49
PDE8A-211ENST00000559742 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
PDE8A-211ENST00000559742 SPRR2EP22531 72 aa5.67□□□□□ -1.5
PDE8A-211ENST00000559742 SPRR2BP35325 72 aa5.67□□□□□ -1.5
PDE8A-211ENST00000559742 SPRR2AP35326 72 aa5.67□□□□□ -1.5
PDE8A-211ENST00000559742 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
PDE8A-211ENST00000559742 KRTAP6-3Q3LI67 103 aa5.58□□□□□ -1.52
PDE8A-211ENST00000559742 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
PDE8A-211ENST00000559742 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
PDE8A-211ENST00000559742 SPRR2DP22532 72 aa5.44□□□□□ -1.54
PDE8A-211ENST00000559742 MT1AP04731 61 aa5.41□□□□□ -1.54
PDE8A-211ENST00000559742 KRTAP5-5Q701N2 237 aaPredicted RBP5.38□□□□□ -1.55
PDE8A-211ENST00000559742 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
PDE8A-211ENST00000559742 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
PDE8A-211ENST00000559742 PRM1P04553 51 aa5.37□□□□□ -1.55
PDE8A-211ENST00000559742 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
PDE8A-211ENST00000559742 LCE3EQ5T5B0 92 aa5.29□□□□□ -1.56
PDE8A-211ENST00000559742 NEBP20929 6669 aa5.25□□□□□ -1.57
PDE8A-211ENST00000559742 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
PDE8A-211ENST00000559742 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
PDE8A-211ENST00000559742 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
PDE8A-211ENST00000559742 MT3P25713 68 aa4.88□□□□□ -1.63
PDE8A-211ENST00000559742 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
PDE8A-211ENST00000559742 MT4P47944 62 aa4.83□□□□□ -1.64
PDE8A-211ENST00000559742 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
PDE8A-211ENST00000559742 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
PDE8A-211ENST00000559742 LCE4AQ5TA78 99 aa4.69□□□□□ -1.66
PDE8A-211ENST00000559742 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
PDE8A-211ENST00000559742 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
PDE8A-211ENST00000559742 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
PDE8A-211ENST00000559742 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
PDE8A-211ENST00000559742 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
PDE8A-211ENST00000559742 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
PDE8A-211ENST00000559742 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
PDE8A-211ENST00000559742 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
PDE8A-211ENST00000559742 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
PDE8A-211ENST00000559742 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
PDE8A-211ENST00000559742 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
PDE8A-211ENST00000559742 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
PDE8A-211ENST00000559742 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
PDE8A-211ENST00000559742 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
PDE8A-211ENST00000559742 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
PDE8A-211ENST00000559742 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
PDE8A-211ENST00000559742 KRTAP5-7Q6L8G8 165 aa3.6□□□□□ -1.83
PDE8A-211ENST00000559742 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
PDE8A-211ENST00000559742 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
PDE8A-211ENST00000559742 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
PDE8A-211ENST00000559742 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
PDE8A-211ENST00000559742 KRTAP21-1Q3LI58 79 aa3.44□□□□□ -1.86
PDE8A-211ENST00000559742 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
PDE8A-211ENST00000559742 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
PDE8A-211ENST00000559742 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
PDE8A-211ENST00000559742 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
PDE8A-211ENST00000559742 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
PDE8A-211ENST00000559742 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
PDE8A-211ENST00000559742 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
PDE8A-211ENST00000559742 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 66.9 ms