RNA–Protein interactions for RNA: ENST00000559729.5

SEC11A-208, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11A, Length 1,256 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-208ENST00000559729 MT1MQ8N339 61 aa7.52□□□□□ -1.21
SEC11A-208ENST00000559729 MT1LQ93083 61 aa7.51□□□□□ -1.21
SEC11A-208ENST00000559729 LCE3AQ5TA76 89 aa7.48□□□□□ -1.21
SEC11A-208ENST00000559729 C10orf95Q9H7T3 257 aa7.46□□□□□ -1.22
SEC11A-208ENST00000559729 HMCN1Q96RW7 5635 aa7.46□□□□□ -1.22
SEC11A-208ENST00000559729 PRR15LQ9BU68 103 aa7.44□□□□□ -1.22
SEC11A-208ENST00000559729 ATP5EP56381 51 aaPredicted RBP7.43□□□□□ -1.22
SEC11A-208ENST00000559729 CCDC179H3BU77 68 aa7.42□□□□□ -1.22
SEC11A-208ENST00000559729 TNP1P09430 55 aa7.41□□□□□ -1.22
SEC11A-208ENST00000559729 KRTAP4-3Q9BYR4 195 aa7.4□□□□□ -1.22
SEC11A-208ENST00000559729 MT4P47944 62 aa7.37□□□□□ -1.23
SEC11A-208ENST00000559729 SVIPQ8NHG7 77 aa7.33□□□□□ -1.24
SEC11A-208ENST00000559729 KRTAP19-4Q3LI73 84 aa7.31□□□□□ -1.24
SEC11A-208ENST00000559729 LINC01558Q9Y6Z2 57 aa7.3□□□□□ -1.24
SEC11A-208ENST00000559729 AHNAK2Q8IVF2 5795 aa7.26□□□□□ -1.25
SEC11A-208ENST00000559729 KRTAP5-4Q6L8H1 288 aa7.22□□□□□ -1.25
SEC11A-208ENST00000559729 TMEM258P61165 79 aa7.18□□□□□ -1.26
SEC11A-208ENST00000559729 UQCR11O14957 56 aa7.17□□□□□ -1.26
SEC11A-208ENST00000559729 KRTAP12-3P60328 96 aa7.16□□□□□ -1.26
SEC11A-208ENST00000559729 KRTAP5-3Q6L8H2 238 aa7.07□□□□□ -1.28
SEC11A-208ENST00000559729 MIR22HGQ0VDD5 57 aa6.98□□□□□ -1.29
SEC11A-208ENST00000559729 KRTAP5-10Q6L8G5 202 aa6.98□□□□□ -1.29
SEC11A-208ENST00000559729 K7ERS5 55 aa6.93□□□□□ -1.3
SEC11A-208ENST00000559729 KRTAP25-1Q3LHN0 102 aa6.93□□□□□ -1.3
SEC11A-208ENST00000559729 H3BS24 57 aa6.9□□□□□ -1.3
SEC11A-208ENST00000559729 KRTAP5-5Q701N2 237 aaPredicted RBP6.9□□□□□ -1.3
SEC11A-208ENST00000559729 V9GYY9 64 aa6.86□□□□□ -1.31
SEC11A-208ENST00000559729 SYNE1Q8NF91 8797 aaKnown RBP6.85□□□□□ -1.31
SEC11A-208ENST00000559729 KRTAP20-2Q3LI61 65 aa6.85□□□□□ -1.31
SEC11A-208ENST00000559729 PSPHP1O15172 72 aa6.79□□□□□ -1.32
SEC11A-208ENST00000559729 Q1T7F1 81 aa6.76□□□□□ -1.33
SEC11A-208ENST00000559729 SPRR5A0A1B0GTR4 108 aa6.75□□□□□ -1.33
SEC11A-208ENST00000559729 KRTAP12-4P60329 112 aa6.72□□□□□ -1.33
SEC11A-208ENST00000559729 KRTAP5-7Q6L8G8 165 aa6.7□□□□□ -1.34
SEC11A-208ENST00000559729 KRTAP23-1A1A580 65 aa6.67□□□□□ -1.34
SEC11A-208ENST00000559729 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
SEC11A-208ENST00000559729 A6NED7 52 aa6.58□□□□□ -1.36
SEC11A-208ENST00000559729 LCE3CQ5T5A8 94 aa6.57□□□□□ -1.36
SEC11A-208ENST00000559729 RPS28P62857 69 aaKnown RBP6.53□□□□□ -1.36
SEC11A-208ENST00000559729 CDC42SE1Q9NRR8 79 aa6.51□□□□□ -1.37
SEC11A-208ENST00000559729 ROMO1P60602 79 aa6.39□□□□□ -1.39
SEC11A-208ENST00000559729 KRTAP6-1Q3LI64 71 aa6.38□□□□□ -1.39
SEC11A-208ENST00000559729 MT1AP04731 61 aa6.37□□□□□ -1.39
SEC11A-208ENST00000559729 KRTAP5-2Q701N4 177 aa6.31□□□□□ -1.4
SEC11A-208ENST00000559729 KRTAP9-6A8MVA2 160 aa6.26□□□□□ -1.41
SEC11A-208ENST00000559729 PRO0628Q9UI54 55 aa6.21□□□□□ -1.42
SEC11A-208ENST00000559729 KRTAP6-2Q3LI66 62 aa6.11□□□□□ -1.43
SEC11A-208ENST00000559729 KRTAP5-8O75690 187 aa6.08□□□□□ -1.44
SEC11A-208ENST00000559729 OBSCNQ5VST9 7968 aa6.06□□□□□ -1.44
SEC11A-208ENST00000559729 AHNAKQ09666 5890 aaKnown RBP6.04□□□□□ -1.44
SEC11A-208ENST00000559729 MUC5BQ9HC84 5762 aaPredicted RBP5.99□□□□□ -1.45
SEC11A-208ENST00000559729 MUC5ACP98088 5654 aa5.95□□□□□ -1.46
SEC11A-208ENST00000559729 BRK1Q8WUW1 75 aa5.92□□□□□ -1.46
SEC11A-208ENST00000559729 PMAIP1Q13794 54 aa5.83□□□□□ -1.48
SEC11A-208ENST00000559729 MT3P25713 68 aa5.82□□□□□ -1.48
SEC11A-208ENST00000559729 KRTAP5-1Q6L8H4 278 aa5.69□□□□□ -1.5
SEC11A-208ENST00000559729 KTN1-AS1Q86SY8 53 aa5.65□□□□□ -1.5
SEC11A-208ENST00000559729 LCE1EQ5T753 118 aa5.35□□□□□ -1.55
SEC11A-208ENST00000559729 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.22□□□□□ -1.57
SEC11A-208ENST00000559729 KRTAP5-11Q6L8G4 156 aa5.13□□□□□ -1.59
SEC11A-208ENST00000559729 LCE1BQ5T7P3 118 aa5.12□□□□□ -1.59
SEC11A-208ENST00000559729 PRAC1Q96KF2 57 aa5.12□□□□□ -1.59
SEC11A-208ENST00000559729 LCE1CQ5T751 118 aa4.98□□□□□ -1.61
SEC11A-208ENST00000559729 LCE3DQ9BYE3 92 aa4.7□□□□□ -1.66
SEC11A-208ENST00000559729 NDUFAF8A1L188 74 aa4.47□□□□□ -1.69
SEC11A-208ENST00000559729 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
SEC11A-208ENST00000559729 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
SEC11A-208ENST00000559729 KRTAP4-4Q9BYR3 166 aa4.39□□□□□ -1.71
SEC11A-208ENST00000559729 LUZP6Q538Z0 58 aa4.34□□□□□ -1.71
SEC11A-208ENST00000559729 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
SEC11A-208ENST00000559729 KRTAP21-2Q3LI59 83 aa4.19□□□□□ -1.74
SEC11A-208ENST00000559729 PHGR1C9JFL3 82 aa4.08□□□□□ -1.76
SEC11A-208ENST00000559729 INE1O15225 51 aa3.84□□□□□ -1.79
SEC11A-208ENST00000559729 MUC19Q7Z5P9 8384 aa3.77□□□□□ -1.81
SEC11A-208ENST00000559729 PRM1P04553 51 aa3.25□□□□□ -1.89
SEC11A-208ENST00000559729 KRTAP21-1Q3LI58 79 aa3.06□□□□□ -1.92
SEC11A-208ENST00000559729 MUC16Q8WXI7 14507 aa2.63□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms