RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 COA5Q86WW8 74 aa3.9□□□□□ -1.79
SNRPA1-208ENST00000559686 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.79
SNRPA1-208ENST00000559686 DMAC1Q96GE9 116 aa3.89□□□□□ -1.79
SNRPA1-208ENST00000559686 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
SNRPA1-208ENST00000559686 UQCR11O14957 56 aa3.87□□□□□ -1.79
SNRPA1-208ENST00000559686 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
SNRPA1-208ENST00000559686 A0A1B0GU33 70 aa3.83□□□□□ -1.8
SNRPA1-208ENST00000559686 S4R3F8 94 aa3.79□□□□□ -1.8
SNRPA1-208ENST00000559686 SPINT4Q6UDR6 99 aa3.75□□□□□ -1.81
SNRPA1-208ENST00000559686 Q8N9L7 120 aa3.75□□□□□ -1.81
SNRPA1-208ENST00000559686 MRPL34Q9BQ48 92 aaKnown RBP3.75□□□□□ -1.81
SNRPA1-208ENST00000559686 PRO2289Q9P1D8 64 aa3.74□□□□□ -1.81
SNRPA1-208ENST00000559686 MT1XP80297 61 aa3.73□□□□□ -1.81
SNRPA1-208ENST00000559686 MMP24-AS1A0A0U1RRL7 71 aa3.72□□□□□ -1.81
SNRPA1-208ENST00000559686 R4GN34 69 aa3.71□□□□□ -1.82
SNRPA1-208ENST00000559686 A0A1B0GU69 56 aa3.69□□□□□ -1.82
SNRPA1-208ENST00000559686 K7EQZ3 153 aa3.69□□□□□ -1.82
SNRPA1-208ENST00000559686 CRIPTQ9P021 101 aa3.68□□□□□ -1.82
SNRPA1-208ENST00000559686 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
SNRPA1-208ENST00000559686 MT3P25713 68 aa3.64□□□□□ -1.83
SNRPA1-208ENST00000559686 TP53AIP1Q9HCN2 124 aa3.64□□□□□ -1.83
SNRPA1-208ENST00000559686 PLAC4Q8WY50 150 aa3.63□□□□□ -1.83
SNRPA1-208ENST00000559686 ACYP2P14621 99 aa3.61□□□□□ -1.83
SNRPA1-208ENST00000559686 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
SNRPA1-208ENST00000559686 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.84
SNRPA1-208ENST00000559686 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
SNRPA1-208ENST00000559686 MT4P47944 62 aa3.56□□□□□ -1.84
SNRPA1-208ENST00000559686 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
SNRPA1-208ENST00000559686 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
SNRPA1-208ENST00000559686 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
SNRPA1-208ENST00000559686 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
SNRPA1-208ENST00000559686 H0YAA0 97 aa3.45□□□□□ -1.86
SNRPA1-208ENST00000559686 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
SNRPA1-208ENST00000559686 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
SNRPA1-208ENST00000559686 M0QZ58 72 aa3.42□□□□□ -1.86
SNRPA1-208ENST00000559686 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
SNRPA1-208ENST00000559686 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
SNRPA1-208ENST00000559686 MT1EP04732 61 aa3.33□□□□□ -1.88
SNRPA1-208ENST00000559686 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
SNRPA1-208ENST00000559686 INE1O15225 51 aa3.31□□□□□ -1.88
SNRPA1-208ENST00000559686 MT1GP13640 62 aa3.24□□□□□ -1.89
SNRPA1-208ENST00000559686 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
SNRPA1-208ENST00000559686 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
SNRPA1-208ENST00000559686 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
SNRPA1-208ENST00000559686 MT1MQ8N339 61 aa3.21□□□□□ -1.9
SNRPA1-208ENST00000559686 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
SNRPA1-208ENST00000559686 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
SNRPA1-208ENST00000559686 C10orf95Q9H7T3 257 aa3.14□□□□□ -1.91
SNRPA1-208ENST00000559686 MT1LQ93083 61 aa3.12□□□□□ -1.91
SNRPA1-208ENST00000559686 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
SNRPA1-208ENST00000559686 A0A0D9SG42 100 aa3.1□□□□□ -1.91
SNRPA1-208ENST00000559686 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
SNRPA1-208ENST00000559686 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
SNRPA1-208ENST00000559686 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
SNRPA1-208ENST00000559686 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
SNRPA1-208ENST00000559686 KRTAP12-4P60329 112 aa3□□□□□ -1.93
SNRPA1-208ENST00000559686 KRTAP13-4Q3LI77 160 aa2.98□□□□□ -1.93
SNRPA1-208ENST00000559686 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
SNRPA1-208ENST00000559686 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
SNRPA1-208ENST00000559686 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
SNRPA1-208ENST00000559686 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
SNRPA1-208ENST00000559686 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
SNRPA1-208ENST00000559686 KRTAP12-1P59990 96 aa2.85□□□□□ -1.95
SNRPA1-208ENST00000559686 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
SNRPA1-208ENST00000559686 KRTAP12-3P60328 96 aa2.75□□□□□ -1.97
SNRPA1-208ENST00000559686 TNP1P09430 55 aa2.73□□□□□ -1.97
SNRPA1-208ENST00000559686 KRTAP6-1Q3LI64 71 aa2.68□□□□□ -1.98
SNRPA1-208ENST00000559686 KRTAP6-2Q3LI66 62 aa2.66□□□□□ -1.98
SNRPA1-208ENST00000559686 MT1AP04731 61 aa2.63□□□□□ -1.99
SNRPA1-208ENST00000559686 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
SNRPA1-208ENST00000559686 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
SNRPA1-208ENST00000559686 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
SNRPA1-208ENST00000559686 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
SNRPA1-208ENST00000559686 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
SNRPA1-208ENST00000559686 PRM1P04553 51 aa1.83□□□□□ -2.12
SNRPA1-208ENST00000559686 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
SNRPA1-208ENST00000559686 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
SNRPA1-208ENST00000559686 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms