RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
GABPB1-208ENST00000558970 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
GABPB1-208ENST00000558970 KRTAP25-1Q3LHN0 102 aa4.69□□□□□ -1.66
GABPB1-208ENST00000558970 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
GABPB1-208ENST00000558970 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
GABPB1-208ENST00000558970 KRTAP19-7Q3SYF9 63 aa4.63□□□□□ -1.67
GABPB1-208ENST00000558970 SPRR2DP22532 72 aa4.61□□□□□ -1.67
GABPB1-208ENST00000558970 GPR98Q8WXG9 6306 aa4.61□□□□□ -1.67
GABPB1-208ENST00000558970 MT1EP04732 61 aa4.58□□□□□ -1.68
GABPB1-208ENST00000558970 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
GABPB1-208ENST00000558970 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
GABPB1-208ENST00000558970 PP632Q6XCG6 107 aa4.48□□□□□ -1.69
GABPB1-208ENST00000558970 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
GABPB1-208ENST00000558970 MT1LQ93083 61 aa4.44□□□□□ -1.7
GABPB1-208ENST00000558970 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
GABPB1-208ENST00000558970 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
GABPB1-208ENST00000558970 MT1GP13640 62 aa4.38□□□□□ -1.71
GABPB1-208ENST00000558970 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
GABPB1-208ENST00000558970 MT1MQ8N339 61 aa4.35□□□□□ -1.71
GABPB1-208ENST00000558970 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
GABPB1-208ENST00000558970 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
GABPB1-208ENST00000558970 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
GABPB1-208ENST00000558970 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
GABPB1-208ENST00000558970 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
GABPB1-208ENST00000558970 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
GABPB1-208ENST00000558970 AHNAK2Q8IVF2 5795 aa4.15□□□□□ -1.74
GABPB1-208ENST00000558970 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
GABPB1-208ENST00000558970 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
GABPB1-208ENST00000558970 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
GABPB1-208ENST00000558970 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
GABPB1-208ENST00000558970 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
GABPB1-208ENST00000558970 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
GABPB1-208ENST00000558970 LUZP6Q538Z0 58 aa4.03□□□□□ -1.76
GABPB1-208ENST00000558970 MT4P47944 62 aa4.02□□□□□ -1.77
GABPB1-208ENST00000558970 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
GABPB1-208ENST00000558970 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
GABPB1-208ENST00000558970 H3BS24 57 aa3.95□□□□□ -1.78
GABPB1-208ENST00000558970 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
GABPB1-208ENST00000558970 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
GABPB1-208ENST00000558970 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
GABPB1-208ENST00000558970 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
GABPB1-208ENST00000558970 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
GABPB1-208ENST00000558970 MT1AP04731 61 aa3.77□□□□□ -1.81
GABPB1-208ENST00000558970 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
GABPB1-208ENST00000558970 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
GABPB1-208ENST00000558970 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
GABPB1-208ENST00000558970 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
GABPB1-208ENST00000558970 A0A0A0MQY5 61 aa3.68□□□□□ -1.82
GABPB1-208ENST00000558970 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
GABPB1-208ENST00000558970 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
GABPB1-208ENST00000558970 AHNAKQ09666 5890 aaKnown RBP3.58□□□□□ -1.84
GABPB1-208ENST00000558970 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
GABPB1-208ENST00000558970 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
GABPB1-208ENST00000558970 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
GABPB1-208ENST00000558970 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
GABPB1-208ENST00000558970 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
GABPB1-208ENST00000558970 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
GABPB1-208ENST00000558970 INE1O15225 51 aa3.42□□□□□ -1.86
GABPB1-208ENST00000558970 MT3P25713 68 aa3.42□□□□□ -1.86
GABPB1-208ENST00000558970 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
GABPB1-208ENST00000558970 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
GABPB1-208ENST00000558970 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
GABPB1-208ENST00000558970 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
GABPB1-208ENST00000558970 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
GABPB1-208ENST00000558970 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
GABPB1-208ENST00000558970 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
GABPB1-208ENST00000558970 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
GABPB1-208ENST00000558970 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
GABPB1-208ENST00000558970 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
GABPB1-208ENST00000558970 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
GABPB1-208ENST00000558970 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
GABPB1-208ENST00000558970 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
GABPB1-208ENST00000558970 PRM1P04553 51 aa2.44□□□□□ -2.02
GABPB1-208ENST00000558970 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
GABPB1-208ENST00000558970 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
GABPB1-208ENST00000558970 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
GABPB1-208ENST00000558970 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
GABPB1-208ENST00000558970 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms