RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 MT1LQ93083 61 aa6.07□□□□□ -1.44
LRRC28-210ENST00000558879 MT1MQ8N339 61 aa6.06□□□□□ -1.44
LRRC28-210ENST00000558879 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
LRRC28-210ENST00000558879 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
LRRC28-210ENST00000558879 LCE3AQ5TA76 89 aa6.04□□□□□ -1.44
LRRC28-210ENST00000558879 TNP1P09430 55 aa6.01□□□□□ -1.45
LRRC28-210ENST00000558879 Q1T7F1 81 aa5.99□□□□□ -1.45
LRRC28-210ENST00000558879 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.46
LRRC28-210ENST00000558879 LCE1DQ5T752 114 aa5.95□□□□□ -1.46
LRRC28-210ENST00000558879 K7ERS5 55 aa5.94□□□□□ -1.46
LRRC28-210ENST00000558879 PSPHP1O15172 72 aa5.93□□□□□ -1.46
LRRC28-210ENST00000558879 LCE4AQ5TA78 99 aa5.93□□□□□ -1.46
LRRC28-210ENST00000558879 RPS28P62857 69 aaKnown RBP5.92□□□□□ -1.46
LRRC28-210ENST00000558879 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
LRRC28-210ENST00000558879 KRTAP5-4Q6L8H1 288 aa5.85□□□□□ -1.47
LRRC28-210ENST00000558879 MT4P47944 62 aa5.83□□□□□ -1.48
LRRC28-210ENST00000558879 GPR98Q8WXG9 6306 aa5.83□□□□□ -1.48
LRRC28-210ENST00000558879 A6NED7 52 aa5.82□□□□□ -1.48
LRRC28-210ENST00000558879 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
LRRC28-210ENST00000558879 KRTAP4-6Q9BYQ5 205 aa5.81□□□□□ -1.48
LRRC28-210ENST00000558879 HMCN1Q96RW7 5635 aa5.81□□□□□ -1.48
LRRC28-210ENST00000558879 KRTAP12-3P60328 96 aa5.79□□□□□ -1.48
LRRC28-210ENST00000558879 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
LRRC28-210ENST00000558879 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
LRRC28-210ENST00000558879 AHNAK2Q8IVF2 5795 aa5.62□□□□□ -1.51
LRRC28-210ENST00000558879 KRTAP5-5Q701N2 237 aaPredicted RBP5.61□□□□□ -1.51
LRRC28-210ENST00000558879 KRTAP5-10Q6L8G5 202 aa5.58□□□□□ -1.52
LRRC28-210ENST00000558879 CDC42SE1Q9NRR8 79 aa5.58□□□□□ -1.52
LRRC28-210ENST00000558879 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
LRRC28-210ENST00000558879 KRTAP20-2Q3LI61 65 aa5.5□□□□□ -1.53
LRRC28-210ENST00000558879 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
LRRC28-210ENST00000558879 ROMO1P60602 79 aa5.45□□□□□ -1.54
LRRC28-210ENST00000558879 KRTAP4-12Q9BQ66 201 aa5.45□□□□□ -1.54
LRRC28-210ENST00000558879 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
LRRC28-210ENST00000558879 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
LRRC28-210ENST00000558879 KRTAP5-7Q6L8G8 165 aa5.38□□□□□ -1.55
LRRC28-210ENST00000558879 LCE3CQ5T5A8 94 aa5.33□□□□□ -1.56
LRRC28-210ENST00000558879 SYNE1Q8NF91 8797 aaKnown RBP5.32□□□□□ -1.56
LRRC28-210ENST00000558879 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
LRRC28-210ENST00000558879 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
LRRC28-210ENST00000558879 KRTAP9-9Q9BYP9 154 aa5.19□□□□□ -1.58
LRRC28-210ENST00000558879 MT1AP04731 61 aa5.17□□□□□ -1.58
LRRC28-210ENST00000558879 PRAC1Q96KF2 57 aa5.14□□□□□ -1.59
LRRC28-210ENST00000558879 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
LRRC28-210ENST00000558879 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
LRRC28-210ENST00000558879 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
LRRC28-210ENST00000558879 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
LRRC28-210ENST00000558879 PMAIP1Q13794 54 aa4.99□□□□□ -1.61
LRRC28-210ENST00000558879 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
LRRC28-210ENST00000558879 KRTAP5-8O75690 187 aa4.88□□□□□ -1.63
LRRC28-210ENST00000558879 PRO0628Q9UI54 55 aa4.81□□□□□ -1.64
LRRC28-210ENST00000558879 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
LRRC28-210ENST00000558879 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
LRRC28-210ENST00000558879 MT3P25713 68 aa4.69□□□□□ -1.66
LRRC28-210ENST00000558879 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
LRRC28-210ENST00000558879 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
LRRC28-210ENST00000558879 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
LRRC28-210ENST00000558879 KTN1-AS1Q86SY8 53 aa4.55□□□□□ -1.68
LRRC28-210ENST00000558879 AHNAKQ09666 5890 aaKnown RBP4.54□□□□□ -1.68
LRRC28-210ENST00000558879 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
LRRC28-210ENST00000558879 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
LRRC28-210ENST00000558879 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
LRRC28-210ENST00000558879 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
LRRC28-210ENST00000558879 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
LRRC28-210ENST00000558879 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
LRRC28-210ENST00000558879 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
LRRC28-210ENST00000558879 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
LRRC28-210ENST00000558879 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
LRRC28-210ENST00000558879 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
LRRC28-210ENST00000558879 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
LRRC28-210ENST00000558879 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
LRRC28-210ENST00000558879 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
LRRC28-210ENST00000558879 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
LRRC28-210ENST00000558879 INE1O15225 51 aa2.86□□□□□ -1.95
LRRC28-210ENST00000558879 PRM1P04553 51 aa2.76□□□□□ -1.97
LRRC28-210ENST00000558879 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
LRRC28-210ENST00000558879 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms