RNA–Protein interactions for RNA: ENST00000558875.1

AC087516.2-203, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 601 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-203ENST00000558875 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
AC087516.2-203ENST00000558875 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.79
AC087516.2-203ENST00000558875 LCE3AQ5TA76 89 aa3.84□□□□□ -1.79
AC087516.2-203ENST00000558875 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
AC087516.2-203ENST00000558875 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
AC087516.2-203ENST00000558875 KRTAP5-9P26371 169 aa3.82□□□□□ -1.8
AC087516.2-203ENST00000558875 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
AC087516.2-203ENST00000558875 SPRR2FQ96RM1 72 aa3.77□□□□□ -1.81
AC087516.2-203ENST00000558875 KRTAP19-5Q3LI72 72 aa3.75□□□□□ -1.81
AC087516.2-203ENST00000558875 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
AC087516.2-203ENST00000558875 KMT2DO14686 5537 aa3.74□□□□□ -1.81
AC087516.2-203ENST00000558875 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
AC087516.2-203ENST00000558875 KTN1-AS1Q86SY8 53 aa3.73□□□□□ -1.81
AC087516.2-203ENST00000558875 MT1EP04732 61 aa3.72□□□□□ -1.81
AC087516.2-203ENST00000558875 SYNE2Q8WXH0 6885 aaKnown RBP3.67□□□□□ -1.82
AC087516.2-203ENST00000558875 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
AC087516.2-203ENST00000558875 SPRR2EP22531 72 aa3.63□□□□□ -1.83
AC087516.2-203ENST00000558875 SPRR2BP35325 72 aa3.63□□□□□ -1.83
AC087516.2-203ENST00000558875 SPRR2AP35326 72 aa3.63□□□□□ -1.83
AC087516.2-203ENST00000558875 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
AC087516.2-203ENST00000558875 MT1LQ93083 61 aa3.61□□□□□ -1.83
AC087516.2-203ENST00000558875 MT1GP13640 62 aa3.57□□□□□ -1.84
AC087516.2-203ENST00000558875 MUC12Q9UKN1 5478 aa3.57□□□□□ -1.84
AC087516.2-203ENST00000558875 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
AC087516.2-203ENST00000558875 SPRR2DP22532 72 aa3.51□□□□□ -1.85
AC087516.2-203ENST00000558875 MT1MQ8N339 61 aa3.51□□□□□ -1.85
AC087516.2-203ENST00000558875 NEBP20929 6669 aa3.5□□□□□ -1.85
AC087516.2-203ENST00000558875 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
AC087516.2-203ENST00000558875 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
AC087516.2-203ENST00000558875 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
AC087516.2-203ENST00000558875 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
AC087516.2-203ENST00000558875 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
AC087516.2-203ENST00000558875 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
AC087516.2-203ENST00000558875 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
AC087516.2-203ENST00000558875 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
AC087516.2-203ENST00000558875 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
AC087516.2-203ENST00000558875 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
AC087516.2-203ENST00000558875 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
AC087516.2-203ENST00000558875 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
AC087516.2-203ENST00000558875 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
AC087516.2-203ENST00000558875 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
AC087516.2-203ENST00000558875 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
AC087516.2-203ENST00000558875 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
AC087516.2-203ENST00000558875 MT3P25713 68 aa3.13□□□□□ -1.91
AC087516.2-203ENST00000558875 MT1AP04731 61 aa3.09□□□□□ -1.91
AC087516.2-203ENST00000558875 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
AC087516.2-203ENST00000558875 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
AC087516.2-203ENST00000558875 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
AC087516.2-203ENST00000558875 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
AC087516.2-203ENST00000558875 MT4P47944 62 aa3.01□□□□□ -1.93
AC087516.2-203ENST00000558875 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
AC087516.2-203ENST00000558875 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
AC087516.2-203ENST00000558875 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
AC087516.2-203ENST00000558875 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
AC087516.2-203ENST00000558875 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
AC087516.2-203ENST00000558875 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
AC087516.2-203ENST00000558875 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
AC087516.2-203ENST00000558875 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
AC087516.2-203ENST00000558875 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
AC087516.2-203ENST00000558875 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.98
AC087516.2-203ENST00000558875 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
AC087516.2-203ENST00000558875 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
AC087516.2-203ENST00000558875 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
AC087516.2-203ENST00000558875 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
AC087516.2-203ENST00000558875 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
AC087516.2-203ENST00000558875 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.02
AC087516.2-203ENST00000558875 INE1O15225 51 aa2.37□□□□□ -2.03
AC087516.2-203ENST00000558875 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
AC087516.2-203ENST00000558875 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
AC087516.2-203ENST00000558875 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
AC087516.2-203ENST00000558875 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
AC087516.2-203ENST00000558875 PRM1P04553 51 aa2.05□□□□□ -2.08
AC087516.2-203ENST00000558875 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
AC087516.2-203ENST00000558875 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
AC087516.2-203ENST00000558875 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
AC087516.2-203ENST00000558875 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
AC087516.2-203ENST00000558875 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 91.9 ms