RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 A0A087WVE0 104 aa2.43□□□□□ -2.02
RTF1-204ENST00000558117 LINC00472Q9H8W2 130 aa2.42□□□□□ -2.02
RTF1-204ENST00000558117 K7EQZ3 153 aa2.41□□□□□ -2.02
RTF1-204ENST00000558117 MT4P47944 62 aa2.41□□□□□ -2.02
RTF1-204ENST00000558117 KRTAP8-1Q8IUC2 63 aa2.41□□□□□ -2.02
RTF1-204ENST00000558117 Q96NJ1 140 aa2.41□□□□□ -2.02
RTF1-204ENST00000558117 SERP1Q9Y6X1 66 aa2.41□□□□□ -2.02
RTF1-204ENST00000558117 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
RTF1-204ENST00000558117 WFDC13Q8IUB5 93 aa2.39□□□□□ -2.03
RTF1-204ENST00000558117 ATP5EP2Q5VTU8 51 aa2.38□□□□□ -2.03
RTF1-204ENST00000558117 LIMD2Q9BT23 127 aa2.38□□□□□ -2.03
RTF1-204ENST00000558117 NDUFB1O75438 58 aa2.37□□□□□ -2.03
RTF1-204ENST00000558117 COX7CP15954 63 aa2.37□□□□□ -2.03
RTF1-204ENST00000558117 MMP24-AS1A0A0U1RRL7 71 aa2.36□□□□□ -2.03
RTF1-204ENST00000558117 HCG22E2RYF7 251 aa2.35□□□□□ -2.03
RTF1-204ENST00000558117 ZCCHC13Q8WW36 166 aaKnown RBP2.35□□□□□ -2.03
RTF1-204ENST00000558117 Q5VV11 94 aa2.34□□□□□ -2.03
RTF1-204ENST00000558117 COA5Q86WW8 74 aa2.34□□□□□ -2.03
RTF1-204ENST00000558117 KRTAP19-8Q3LI54 63 aa2.33□□□□□ -2.04
RTF1-204ENST00000558117 MRPL34Q9BQ48 92 aaKnown RBP2.32□□□□□ -2.04
RTF1-204ENST00000558117 ATOX1O00244 68 aa2.31□□□□□ -2.04
RTF1-204ENST00000558117 CSAG1Q6PB30 78 aa2.3□□□□□ -2.04
RTF1-204ENST00000558117 SERP2Q8N6R1 65 aa2.3□□□□□ -2.04
RTF1-204ENST00000558117 CDC42SE1Q9NRR8 79 aa2.3□□□□□ -2.04
RTF1-204ENST00000558117 SNURFQ9Y675 71 aa2.3□□□□□ -2.04
RTF1-204ENST00000558117 C20orf197Q8N268 126 aa2.29□□□□□ -2.04
RTF1-204ENST00000558117 H0Y9P7 68 aa2.28□□□□□ -2.04
RTF1-204ENST00000558117 LINC00208Q96KT6 92 aa2.28□□□□□ -2.04
RTF1-204ENST00000558117 CYSTM1Q9H1C7 97 aa2.28□□□□□ -2.04
RTF1-204ENST00000558117 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
RTF1-204ENST00000558117 TP53AIP1Q9HCN2 124 aa2.26□□□□□ -2.05
RTF1-204ENST00000558117 TRAV22A0A0B4J277 110 aa2.25□□□□□ -2.05
RTF1-204ENST00000558117 INE1O15225 51 aa2.25□□□□□ -2.05
RTF1-204ENST00000558117 KLKP1Q107X0 134 aa2.25□□□□□ -2.05
RTF1-204ENST00000558117 DMAC1Q96GE9 116 aa2.25□□□□□ -2.05
RTF1-204ENST00000558117 KRTAP13-4Q3LI77 160 aa2.24□□□□□ -2.05
RTF1-204ENST00000558117 CYP4F30PQ9H0H9 118 aa2.23□□□□□ -2.05
RTF1-204ENST00000558117 SPINK7P58062 85 aa2.22□□□□□ -2.05
RTF1-204ENST00000558117 LOC101927531A0A1B0GV80 90 aa2.21□□□□□ -2.06
RTF1-204ENST00000558117 SPRR2GQ9BYE4 73 aa2.21□□□□□ -2.06
RTF1-204ENST00000558117 H7BZZ5 65 aa2.2□□□□□ -2.06
RTF1-204ENST00000558117 ATP5EP56381 51 aaPredicted RBP2.19□□□□□ -2.06
RTF1-204ENST00000558117 SPTSSBQ8NFR3 76 aa2.19□□□□□ -2.06
RTF1-204ENST00000558117 NDUFC1O43677 76 aa2.17□□□□□ -2.06
RTF1-204ENST00000558117 CHKB-CPT1BH3BT56 60 aa2.12□□□□□ -2.07
RTF1-204ENST00000558117 ACYP2P14621 99 aa2.12□□□□□ -2.07
RTF1-204ENST00000558117 MT1XP80297 61 aa2.12□□□□□ -2.07
RTF1-204ENST00000558117 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
RTF1-204ENST00000558117 SYNE1Q8NF91 8797 aaKnown RBP2.1□□□□□ -2.07
RTF1-204ENST00000558117 H1FX-AS1Q4G0G2 97 aa2.1□□□□□ -2.07
RTF1-204ENST00000558117 KRTAP12-1P59990 96 aa2.09□□□□□ -2.07
RTF1-204ENST00000558117 S4R3F8 94 aa2.08□□□□□ -2.08
RTF1-204ENST00000558117 PRR15LQ9BU68 103 aa2.04□□□□□ -2.08
RTF1-204ENST00000558117 KRTAP19-3Q7Z4W3 81 aa2.03□□□□□ -2.08
RTF1-204ENST00000558117 LINC01558Q9Y6Z2 57 aa2.01□□□□□ -2.09
RTF1-204ENST00000558117 A0A1B0GU69 56 aa2□□□□□ -2.09
RTF1-204ENST00000558117 SPATA8Q6RVD6 105 aa1.97□□□□□ -2.09
RTF1-204ENST00000558117 A0A0D9SG42 100 aa1.95□□□□□ -2.1
RTF1-204ENST00000558117 M0QZ58 72 aa1.93□□□□□ -2.1
RTF1-204ENST00000558117 MT1EP04732 61 aa1.93□□□□□ -2.1
RTF1-204ENST00000558117 H0YAA0 97 aa1.92□□□□□ -2.1
RTF1-204ENST00000558117 UQCR11O14957 56 aa1.92□□□□□ -2.1
RTF1-204ENST00000558117 KRTAP19-7Q3SYF9 63 aa1.92□□□□□ -2.1
RTF1-204ENST00000558117 MT1GP13640 62 aa1.9□□□□□ -2.11
RTF1-204ENST00000558117 MT1MQ8N339 61 aa1.88□□□□□ -2.11
RTF1-204ENST00000558117 CRIPTQ9P021 101 aa1.87□□□□□ -2.11
RTF1-204ENST00000558117 PLAC4Q8WY50 150 aa1.83□□□□□ -2.12
RTF1-204ENST00000558117 C10orf95Q9H7T3 257 aa1.77□□□□□ -2.13
RTF1-204ENST00000558117 MT1LQ93083 61 aa1.72□□□□□ -2.13
RTF1-204ENST00000558117 TNP1P09430 55 aa1.68□□□□□ -2.14
RTF1-204ENST00000558117 KRTAP19-5Q3LI72 72 aa1.66□□□□□ -2.14
RTF1-204ENST00000558117 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
RTF1-204ENST00000558117 KRTAP6-2Q3LI66 62 aa1.55□□□□□ -2.16
RTF1-204ENST00000558117 KRTAP6-1Q3LI64 71 aa1.49□□□□□ -2.17
RTF1-204ENST00000558117 MT1AP04731 61 aa1.44□□□□□ -2.18
RTF1-204ENST00000558117 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
RTF1-204ENST00000558117 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
RTF1-204ENST00000558117 PRM1P04553 51 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 64.8 ms