RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ROMO1P60602 79 aa3.18□□□□□ -1.9
SPG11-204ENST00000557866 KRTAP19-8Q3LI54 63 aa3.18□□□□□ -1.9
SPG11-204ENST00000557866 PRAC1Q96KF2 57 aa3.18□□□□□ -1.9
SPG11-204ENST00000557866 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
SPG11-204ENST00000557866 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
SPG11-204ENST00000557866 MT1BP07438 61 aa3.15□□□□□ -1.91
SPG11-204ENST00000557866 C10orf95Q9H7T3 257 aa3.14□□□□□ -1.91
SPG11-204ENST00000557866 CAMK2N1Q7Z7J9 78 aa3.12□□□□□ -1.91
SPG11-204ENST00000557866 PLAC4Q8WY50 150 aa3.12□□□□□ -1.91
SPG11-204ENST00000557866 KRTAP25-1Q3LHN0 102 aa3.07□□□□□ -1.92
SPG11-204ENST00000557866 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
SPG11-204ENST00000557866 USH2AO75445 5202 aa3.05□□□□□ -1.92
SPG11-204ENST00000557866 MT1XP80297 61 aa3.05□□□□□ -1.92
SPG11-204ENST00000557866 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
SPG11-204ENST00000557866 TNP1P09430 55 aa2.98□□□□□ -1.93
SPG11-204ENST00000557866 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
SPG11-204ENST00000557866 LCE3AQ5TA76 89 aa2.93□□□□□ -1.94
SPG11-204ENST00000557866 PRO2289Q9P1D8 64 aa2.93□□□□□ -1.94
SPG11-204ENST00000557866 KRTAP19-6Q3LI70 58 aa2.9□□□□□ -1.95
SPG11-204ENST00000557866 PP632Q6XCG6 107 aa2.9□□□□□ -1.95
SPG11-204ENST00000557866 FSIP2Q5CZC0 6907 aa2.83□□□□□ -1.96
SPG11-204ENST00000557866 KRTAP8-1Q8IUC2 63 aa2.83□□□□□ -1.96
SPG11-204ENST00000557866 KMT2DO14686 5537 aa2.82□□□□□ -1.96
SPG11-204ENST00000557866 FCGBPQ9Y6R7 5405 aaPredicted RBP2.81□□□□□ -1.96
SPG11-204ENST00000557866 KRTAP12-3P60328 96 aa2.76□□□□□ -1.97
SPG11-204ENST00000557866 KRTAP19-5Q3LI72 72 aa2.76□□□□□ -1.97
SPG11-204ENST00000557866 KRTAP19-7Q3SYF9 63 aa2.73□□□□□ -1.97
SPG11-204ENST00000557866 CRCT1Q9UGL9 99 aa2.72□□□□□ -1.97
SPG11-204ENST00000557866 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
SPG11-204ENST00000557866 MT1EP04732 61 aa2.67□□□□□ -1.98
SPG11-204ENST00000557866 SPRR5A0A1B0GTR4 108 aa2.64□□□□□ -1.99
SPG11-204ENST00000557866 MT1LQ93083 61 aa2.62□□□□□ -1.99
SPG11-204ENST00000557866 MACF1Q9UPN3 7388 aaKnown RBP2.61□□□□□ -1.99
SPG11-204ENST00000557866 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
SPG11-204ENST00000557866 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
SPG11-204ENST00000557866 LCE1CQ5T751 118 aa2.58□□□□□ -2
SPG11-204ENST00000557866 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
SPG11-204ENST00000557866 SPRR2FQ96RM1 72 aa2.56□□□□□ -2
SPG11-204ENST00000557866 KRTAP19-3Q7Z4W3 81 aa2.54□□□□□ -2
SPG11-204ENST00000557866 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
SPG11-204ENST00000557866 MT1GP13640 62 aa2.51□□□□□ -2.01
SPG11-204ENST00000557866 MT1MQ8N339 61 aa2.51□□□□□ -2.01
SPG11-204ENST00000557866 MDN1Q9NU22 5596 aa2.51□□□□□ -2.01
SPG11-204ENST00000557866 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
SPG11-204ENST00000557866 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
SPG11-204ENST00000557866 SPRR2EP22531 72 aa2.42□□□□□ -2.02
SPG11-204ENST00000557866 SPRR2BP35325 72 aa2.42□□□□□ -2.02
SPG11-204ENST00000557866 SPRR2AP35326 72 aa2.42□□□□□ -2.02
SPG11-204ENST00000557866 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
SPG11-204ENST00000557866 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
SPG11-204ENST00000557866 SPRR2DP22532 72 aa2.32□□□□□ -2.04
SPG11-204ENST00000557866 NEBP20929 6669 aa2.32□□□□□ -2.04
SPG11-204ENST00000557866 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
SPG11-204ENST00000557866 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
SPG11-204ENST00000557866 KRTAP2-1Q9BYU5 128 aa2.3□□□□□ -2.04
SPG11-204ENST00000557866 KRTAP6-1Q3LI64 71 aa2.22□□□□□ -2.05
SPG11-204ENST00000557866 SYNE1Q8NF91 8797 aaKnown RBP2.22□□□□□ -2.05
SPG11-204ENST00000557866 MT1AP04731 61 aa2.21□□□□□ -2.06
SPG11-204ENST00000557866 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
SPG11-204ENST00000557866 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
SPG11-204ENST00000557866 KRTAP20-1Q3LI63 56 aa2.09□□□□□ -2.07
SPG11-204ENST00000557866 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
SPG11-204ENST00000557866 INE1O15225 51 aa2.03□□□□□ -2.08
SPG11-204ENST00000557866 MT4P47944 62 aa2.03□□□□□ -2.08
SPG11-204ENST00000557866 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
SPG11-204ENST00000557866 KRTAP20-2Q3LI61 65 aa2□□□□□ -2.09
SPG11-204ENST00000557866 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
SPG11-204ENST00000557866 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
SPG11-204ENST00000557866 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
SPG11-204ENST00000557866 PRM1P04553 51 aa1.68□□□□□ -2.14
SPG11-204ENST00000557866 MUC5ACP98088 5654 aa1.65□□□□□ -2.14
SPG11-204ENST00000557866 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
SPG11-204ENST00000557866 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
SPG11-204ENST00000557866 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
SPG11-204ENST00000557866 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
SPG11-204ENST00000557866 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
SPG11-204ENST00000557866 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
SPG11-204ENST00000557866 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms