RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 A6NED7 52 aa3.67□□□□□ -1.82
CHD8-214ENST00000557727 MIR22HGQ0VDD5 57 aa3.67□□□□□ -1.82
CHD8-214ENST00000557727 KRTAP12-1P59990 96 aa3.66□□□□□ -1.82
CHD8-214ENST00000557727 KRTAP12-2P59991 146 aa3.65□□□□□ -1.83
CHD8-214ENST00000557727 SPINT4Q6UDR6 99 aa3.65□□□□□ -1.83
CHD8-214ENST00000557727 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
CHD8-214ENST00000557727 CAMK2N1Q7Z7J9 78 aa3.63□□□□□ -1.83
CHD8-214ENST00000557727 KMT2DO14686 5537 aa3.63□□□□□ -1.83
CHD8-214ENST00000557727 K7ERS5 55 aa3.57□□□□□ -1.84
CHD8-214ENST00000557727 CDC42SE1Q9NRR8 79 aa3.56□□□□□ -1.84
CHD8-214ENST00000557727 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
CHD8-214ENST00000557727 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
CHD8-214ENST00000557727 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
CHD8-214ENST00000557727 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
CHD8-214ENST00000557727 C10orf95Q9H7T3 257 aa3.49□□□□□ -1.85
CHD8-214ENST00000557727 NEBP20929 6669 aa3.48□□□□□ -1.85
CHD8-214ENST00000557727 BRK1Q8WUW1 75 aa3.47□□□□□ -1.85
CHD8-214ENST00000557727 SPRR2FQ96RM1 72 aa3.47□□□□□ -1.85
CHD8-214ENST00000557727 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
CHD8-214ENST00000557727 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
CHD8-214ENST00000557727 MDN1Q9NU22 5596 aa3.43□□□□□ -1.86
CHD8-214ENST00000557727 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
CHD8-214ENST00000557727 TNP1P09430 55 aa3.41□□□□□ -1.86
CHD8-214ENST00000557727 SPRR2EP22531 72 aa3.36□□□□□ -1.87
CHD8-214ENST00000557727 SPRR2BP35325 72 aa3.36□□□□□ -1.87
CHD8-214ENST00000557727 SPRR2AP35326 72 aa3.36□□□□□ -1.87
CHD8-214ENST00000557727 ROMO1P60602 79 aa3.36□□□□□ -1.87
CHD8-214ENST00000557727 KRTAP25-1Q3LHN0 102 aa3.36□□□□□ -1.87
CHD8-214ENST00000557727 PRO0628Q9UI54 55 aa3.36□□□□□ -1.87
CHD8-214ENST00000557727 MT1EP04732 61 aa3.35□□□□□ -1.87
CHD8-214ENST00000557727 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
CHD8-214ENST00000557727 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
CHD8-214ENST00000557727 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
CHD8-214ENST00000557727 PMAIP1Q13794 54 aa3.26□□□□□ -1.89
CHD8-214ENST00000557727 KRTAP19-3Q7Z4W3 81 aa3.26□□□□□ -1.89
CHD8-214ENST00000557727 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
CHD8-214ENST00000557727 SPRR2DP22532 72 aa3.24□□□□□ -1.89
CHD8-214ENST00000557727 MT1LQ93083 61 aa3.24□□□□□ -1.89
CHD8-214ENST00000557727 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
CHD8-214ENST00000557727 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
CHD8-214ENST00000557727 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
CHD8-214ENST00000557727 PP632Q6XCG6 107 aa3.2□□□□□ -1.9
CHD8-214ENST00000557727 MT1GP13640 62 aa3.19□□□□□ -1.9
CHD8-214ENST00000557727 MT1MQ8N339 61 aa3.17□□□□□ -1.9
CHD8-214ENST00000557727 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
CHD8-214ENST00000557727 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
CHD8-214ENST00000557727 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
CHD8-214ENST00000557727 KTN1-AS1Q86SY8 53 aa3.11□□□□□ -1.91
CHD8-214ENST00000557727 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
CHD8-214ENST00000557727 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
CHD8-214ENST00000557727 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
CHD8-214ENST00000557727 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
CHD8-214ENST00000557727 MT4P47944 62 aa2.83□□□□□ -1.96
CHD8-214ENST00000557727 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
CHD8-214ENST00000557727 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
CHD8-214ENST00000557727 MT1AP04731 61 aa2.74□□□□□ -1.97
CHD8-214ENST00000557727 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
CHD8-214ENST00000557727 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
CHD8-214ENST00000557727 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
CHD8-214ENST00000557727 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
CHD8-214ENST00000557727 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
CHD8-214ENST00000557727 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
CHD8-214ENST00000557727 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
CHD8-214ENST00000557727 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
CHD8-214ENST00000557727 LUZP6Q538Z0 58 aa2.57□□□□□ -2
CHD8-214ENST00000557727 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
CHD8-214ENST00000557727 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
CHD8-214ENST00000557727 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
CHD8-214ENST00000557727 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
CHD8-214ENST00000557727 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
CHD8-214ENST00000557727 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
CHD8-214ENST00000557727 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
CHD8-214ENST00000557727 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
CHD8-214ENST00000557727 INE1O15225 51 aa2.04□□□□□ -2.08
CHD8-214ENST00000557727 PRM1P04553 51 aa1.73□□□□□ -2.13
CHD8-214ENST00000557727 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
CHD8-214ENST00000557727 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
CHD8-214ENST00000557727 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 699.6 ms