RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 KMT2DO14686 5537 aa2.72□□□□□ -1.97
VPS33B-207ENST00000557470 KRTAP10-12P60413 245 aa2.7□□□□□ -1.98
VPS33B-207ENST00000557470 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
VPS33B-207ENST00000557470 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
VPS33B-207ENST00000557470 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
VPS33B-207ENST00000557470 MT1BP07438 61 aa2.67□□□□□ -1.98
VPS33B-207ENST00000557470 H1FX-AS1Q4G0G2 97 aa2.66□□□□□ -1.98
VPS33B-207ENST00000557470 MMP24-AS1A0A0U1RRL7 71 aa2.65□□□□□ -1.99
VPS33B-207ENST00000557470 KRTAP2-3P0C7H8 128 aa2.64□□□□□ -1.99
VPS33B-207ENST00000557470 KRTAP2-4Q9BYR9 128 aa2.64□□□□□ -1.99
VPS33B-207ENST00000557470 KRTAP19-8Q3LI54 63 aa2.62□□□□□ -1.99
VPS33B-207ENST00000557470 MRPL34Q9BQ48 92 aaKnown RBP2.6□□□□□ -1.99
VPS33B-207ENST00000557470 SPRR2GQ9BYE4 73 aa2.6□□□□□ -1.99
VPS33B-207ENST00000557470 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
VPS33B-207ENST00000557470 SPRR2EP22531 72 aa2.58□□□□□ -2
VPS33B-207ENST00000557470 SPRR2BP35325 72 aa2.58□□□□□ -2
VPS33B-207ENST00000557470 SPRR2AP35326 72 aa2.58□□□□□ -2
VPS33B-207ENST00000557470 SPRR2FQ96RM1 72 aa2.57□□□□□ -2
VPS33B-207ENST00000557470 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
VPS33B-207ENST00000557470 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
VPS33B-207ENST00000557470 KRTAP2-1Q9BYU5 128 aa2.55□□□□□ -2
VPS33B-207ENST00000557470 CRIPTQ9P021 101 aa2.55□□□□□ -2
VPS33B-207ENST00000557470 S4R3F8 94 aa2.52□□□□□ -2.01
VPS33B-207ENST00000557470 H0YAA0 97 aa2.51□□□□□ -2.01
VPS33B-207ENST00000557470 SPRR2DP22532 72 aa2.49□□□□□ -2.01
VPS33B-207ENST00000557470 KRTAP8-1Q8IUC2 63 aa2.49□□□□□ -2.01
VPS33B-207ENST00000557470 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
VPS33B-207ENST00000557470 MT1XP80297 61 aa2.46□□□□□ -2.02
VPS33B-207ENST00000557470 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
VPS33B-207ENST00000557470 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
VPS33B-207ENST00000557470 INE1O15225 51 aa2.43□□□□□ -2.02
VPS33B-207ENST00000557470 KRTAP12-2P59991 146 aa2.42□□□□□ -2.02
VPS33B-207ENST00000557470 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
VPS33B-207ENST00000557470 C10orf95Q9H7T3 257 aa2.33□□□□□ -2.04
VPS33B-207ENST00000557470 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
VPS33B-207ENST00000557470 PP632Q6XCG6 107 aa2.29□□□□□ -2.04
VPS33B-207ENST00000557470 KRTAP4-3Q9BYR4 195 aa2.29□□□□□ -2.04
VPS33B-207ENST00000557470 SPRR5A0A1B0GTR4 108 aa2.28□□□□□ -2.04
VPS33B-207ENST00000557470 M0QZ58 72 aa2.28□□□□□ -2.04
VPS33B-207ENST00000557470 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
VPS33B-207ENST00000557470 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
VPS33B-207ENST00000557470 KRTAP13-4Q3LI77 160 aa2.23□□□□□ -2.05
VPS33B-207ENST00000557470 A0A0D9SG42 100 aa2.21□□□□□ -2.06
VPS33B-207ENST00000557470 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
VPS33B-207ENST00000557470 MT4P47944 62 aa2.2□□□□□ -2.06
VPS33B-207ENST00000557470 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
VPS33B-207ENST00000557470 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
VPS33B-207ENST00000557470 MT1EP04732 61 aa2.19□□□□□ -2.06
VPS33B-207ENST00000557470 KRTAP19-7Q3SYF9 63 aa2.19□□□□□ -2.06
VPS33B-207ENST00000557470 KRTAP12-1P59990 96 aa2.16□□□□□ -2.06
VPS33B-207ENST00000557470 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
VPS33B-207ENST00000557470 MT1GP13640 62 aa2.11□□□□□ -2.07
VPS33B-207ENST00000557470 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
VPS33B-207ENST00000557470 KRTAP19-5Q3LI72 72 aa2.09□□□□□ -2.07
VPS33B-207ENST00000557470 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.07
VPS33B-207ENST00000557470 MT1MQ8N339 61 aa2.09□□□□□ -2.07
VPS33B-207ENST00000557470 MT1LQ93083 61 aa2.06□□□□□ -2.08
VPS33B-207ENST00000557470 KRTAP20-2Q3LI61 65 aa2.01□□□□□ -2.09
VPS33B-207ENST00000557470 TNP1P09430 55 aa1.96□□□□□ -2.1
VPS33B-207ENST00000557470 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
VPS33B-207ENST00000557470 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
VPS33B-207ENST00000557470 LCE3DQ9BYE3 92 aa1.93□□□□□ -2.1
VPS33B-207ENST00000557470 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
VPS33B-207ENST00000557470 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
VPS33B-207ENST00000557470 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
VPS33B-207ENST00000557470 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
VPS33B-207ENST00000557470 SYNE1Q8NF91 8797 aaKnown RBP1.86□□□□□ -2.11
VPS33B-207ENST00000557470 KRTAP12-3P60328 96 aa1.85□□□□□ -2.11
VPS33B-207ENST00000557470 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
VPS33B-207ENST00000557470 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
VPS33B-207ENST00000557470 MT1AP04731 61 aa1.73□□□□□ -2.13
VPS33B-207ENST00000557470 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
VPS33B-207ENST00000557470 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
VPS33B-207ENST00000557470 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
VPS33B-207ENST00000557470 PRM1P04553 51 aa1.35□□□□□ -2.19
VPS33B-207ENST00000557470 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
VPS33B-207ENST00000557470 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
VPS33B-207ENST00000557470 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 125 ms