RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
SLIRP-209ENST00000557342 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
SLIRP-209ENST00000557342 SPRR2DP22532 72 aa4.72□□□□□ -1.65
SLIRP-209ENST00000557342 TNP1P09430 55 aa4.68□□□□□ -1.66
SLIRP-209ENST00000557342 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
SLIRP-209ENST00000557342 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
SLIRP-209ENST00000557342 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
SLIRP-209ENST00000557342 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
SLIRP-209ENST00000557342 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
SLIRP-209ENST00000557342 H3BS24 57 aa4.63□□□□□ -1.67
SLIRP-209ENST00000557342 MT1EP04732 61 aa4.63□□□□□ -1.67
SLIRP-209ENST00000557342 ROMO1P60602 79 aa4.63□□□□□ -1.67
SLIRP-209ENST00000557342 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
SLIRP-209ENST00000557342 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
SLIRP-209ENST00000557342 KRTAP19-5Q3LI72 72 aa4.59□□□□□ -1.67
SLIRP-209ENST00000557342 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
SLIRP-209ENST00000557342 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
SLIRP-209ENST00000557342 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
SLIRP-209ENST00000557342 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
SLIRP-209ENST00000557342 LCE3AQ5TA76 89 aa4.56□□□□□ -1.68
SLIRP-209ENST00000557342 MT1GP13640 62 aa4.51□□□□□ -1.69
SLIRP-209ENST00000557342 PP632Q6XCG6 107 aa4.49□□□□□ -1.69
SLIRP-209ENST00000557342 MT1LQ93083 61 aa4.45□□□□□ -1.7
SLIRP-209ENST00000557342 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
SLIRP-209ENST00000557342 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
SLIRP-209ENST00000557342 KTN1-AS1Q86SY8 53 aa4.42□□□□□ -1.7
SLIRP-209ENST00000557342 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
SLIRP-209ENST00000557342 MT1MQ8N339 61 aa4.4□□□□□ -1.71
SLIRP-209ENST00000557342 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
SLIRP-209ENST00000557342 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
SLIRP-209ENST00000557342 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
SLIRP-209ENST00000557342 SVIPQ8NHG7 77 aa4.21□□□□□ -1.74
SLIRP-209ENST00000557342 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
SLIRP-209ENST00000557342 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
SLIRP-209ENST00000557342 MT4P47944 62 aa4.1□□□□□ -1.75
SLIRP-209ENST00000557342 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
SLIRP-209ENST00000557342 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
SLIRP-209ENST00000557342 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
SLIRP-209ENST00000557342 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
SLIRP-209ENST00000557342 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
SLIRP-209ENST00000557342 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
SLIRP-209ENST00000557342 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
SLIRP-209ENST00000557342 KRTAP5-7Q6L8G8 165 aa3.92□□□□□ -1.78
SLIRP-209ENST00000557342 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.79
SLIRP-209ENST00000557342 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
SLIRP-209ENST00000557342 MT1AP04731 61 aa3.8□□□□□ -1.8
SLIRP-209ENST00000557342 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
SLIRP-209ENST00000557342 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
SLIRP-209ENST00000557342 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
SLIRP-209ENST00000557342 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
SLIRP-209ENST00000557342 LUZP6Q538Z0 58 aa3.58□□□□□ -1.84
SLIRP-209ENST00000557342 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
SLIRP-209ENST00000557342 MT3P25713 68 aa3.48□□□□□ -1.85
SLIRP-209ENST00000557342 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
SLIRP-209ENST00000557342 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
SLIRP-209ENST00000557342 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
SLIRP-209ENST00000557342 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
SLIRP-209ENST00000557342 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
SLIRP-209ENST00000557342 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
SLIRP-209ENST00000557342 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
SLIRP-209ENST00000557342 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
SLIRP-209ENST00000557342 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
SLIRP-209ENST00000557342 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
SLIRP-209ENST00000557342 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
SLIRP-209ENST00000557342 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
SLIRP-209ENST00000557342 A0A0A0MQY5 61 aa2.94□□□□□ -1.94
SLIRP-209ENST00000557342 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
SLIRP-209ENST00000557342 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
SLIRP-209ENST00000557342 INE1O15225 51 aa2.82□□□□□ -1.96
SLIRP-209ENST00000557342 LCE1FQ5T754 118 aa2.57□□□□□ -2
SLIRP-209ENST00000557342 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
SLIRP-209ENST00000557342 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
SLIRP-209ENST00000557342 PRM1P04553 51 aa2.39□□□□□ -2.03
SLIRP-209ENST00000557342 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
SLIRP-209ENST00000557342 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
SLIRP-209ENST00000557342 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
SLIRP-209ENST00000557342 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 62 ms