RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, human

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-223	ENST00000557320	KRTAP6-3	Q3LI67	103 aa		5.22	□□□□□ -1.57
PAPOLA-223	ENST00000557320	KRTAP4-7	Q9BYR0	210 aa		5.14	□□□□□ -1.59
PAPOLA-223	ENST00000557320	KRTAP5-9	P26371	169 aa		5.13	□□□□□ -1.59
PAPOLA-223	ENST00000557320	KRTAP12-4	P60329	112 aa		5.12	□□□□□ -1.59
PAPOLA-223	ENST00000557320	SYNE2	Q8WXH0	6885 aa	Known RBP	5.11	□□□□□ -1.59
PAPOLA-223	ENST00000557320	KMT2D	O14686	5537 aa		5.06	□□□□□ -1.6
PAPOLA-223	ENST00000557320	KRTAP4-8	A0A0G2JLE6	195 aa		4.99	□□□□□ -1.61
PAPOLA-223	ENST00000557320	KRTAP4-8	Q9BYQ9	185 aa		4.99	□□□□□ -1.61
PAPOLA-223	ENST00000557320	SPRR2F	Q96RM1	72 aa		4.91	□□□□□ -1.62
PAPOLA-223	ENST00000557320	NEB	P20929	6669 aa		4.89	□□□□□ -1.63
PAPOLA-223	ENST00000557320	MUC12	Q9UKN1	5478 aa		4.87	□□□□□ -1.63
PAPOLA-223	ENST00000557320	LCE1A	Q5T7P2	110 aa		4.82	□□□□□ -1.64
PAPOLA-223	ENST00000557320	KRTAP19-7	Q3SYF9	63 aa		4.8	□□□□□ -1.64
PAPOLA-223	ENST00000557320	SPRR2E	P22531	72 aa		4.79	□□□□□ -1.64
PAPOLA-223	ENST00000557320	SPRR2B	P35325	72 aa		4.79	□□□□□ -1.64
PAPOLA-223	ENST00000557320	SPRR2A	P35326	72 aa		4.79	□□□□□ -1.64
PAPOLA-223	ENST00000557320	SYNE1	Q8NF91	8797 aa	Known RBP	4.75	□□□□□ -1.65
PAPOLA-223	ENST00000557320	MT1E	P04732	61 aa		4.75	□□□□□ -1.65
PAPOLA-223	ENST00000557320	MDN1	Q9NU22	5596 aa		4.75	□□□□□ -1.65
PAPOLA-223	ENST00000557320	LOC100996750	A0A140TA64	210 aa		4.74	□□□□□ -1.65
PAPOLA-223	ENST00000557320	MT1L	Q93083	61 aa		4.71	□□□□□ -1.66
PAPOLA-223	ENST00000557320	OBSCN	Q5VST9	7968 aa		4.68	□□□□□ -1.66
PAPOLA-223	ENST00000557320	KRTAP20-1	Q3LI63	56 aa		4.66	□□□□□ -1.66
PAPOLA-223	ENST00000557320	MT1G	P13640	62 aa		4.66	□□□□□ -1.66
PAPOLA-223	ENST00000557320	KRTAP19-3	Q7Z4W3	81 aa		4.65	□□□□□ -1.67
PAPOLA-223	ENST00000557320	LCE5A	Q5TCM9	118 aa		4.64	□□□□□ -1.67
PAPOLA-223	ENST00000557320	SPRR2D	P22532	72 aa		4.64	□□□□□ -1.67
PAPOLA-223	ENST00000557320	KRTAP19-4	Q3LI73	84 aa		4.63	□□□□□ -1.67
PAPOLA-223	ENST00000557320	PRM1	P04553	51 aa		4.61	□□□□□ -1.67
PAPOLA-223	ENST00000557320	KRTAP4-3	Q9BYR4	195 aa		4.59	□□□□□ -1.67
PAPOLA-223	ENST00000557320	KRTAP4-9	Q9BYQ8	210 aa		4.59	□□□□□ -1.68
PAPOLA-223	ENST00000557320	LCE3B	Q5TA77	95 aa		4.57	□□□□□ -1.68
PAPOLA-223	ENST00000557320	KRTAP2-2	Q9BYT5	123 aa		4.5	□□□□□ -1.69
PAPOLA-223	ENST00000557320	MT1M	Q8N339	61 aa		4.49	□□□□□ -1.69
PAPOLA-223	ENST00000557320	DST	Q03001	7570 aa	Known RBP	4.49	□□□□□ -1.69
PAPOLA-223	ENST00000557320	LCE3D	Q9BYE3	92 aa		4.43	□□□□□ -1.7
PAPOLA-223	ENST00000557320	LCE3E	Q5T5B0	92 aa		4.42	□□□□□ -1.7
PAPOLA-223	ENST00000557320	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.3	□□□□□ -1.72
PAPOLA-223	ENST00000557320	LCE1E	Q5T753	118 aa		4.26	□□□□□ -1.73
PAPOLA-223	ENST00000557320	MT1A	P04731	61 aa		4.22	□□□□□ -1.73
PAPOLA-223	ENST00000557320	KRTAP5-4	Q6L8H1	288 aa		4.19	□□□□□ -1.74
PAPOLA-223	ENST00000557320	LCE4A	Q5TA78	99 aa		4.19	□□□□□ -1.74
PAPOLA-223	ENST00000557320	KRTAP6-2	Q3LI66	62 aa		4.17	□□□□□ -1.74
PAPOLA-223	ENST00000557320	KRTAP6-1	Q3LI64	71 aa		4.07	□□□□□ -1.76
PAPOLA-223	ENST00000557320	LCE1D	Q5T752	114 aa		4.06	□□□□□ -1.76
PAPOLA-223	ENST00000557320	MT4	P47944	62 aa		3.99	□□□□□ -1.77
PAPOLA-223	ENST00000557320	KRTAP4-6	Q9BYQ5	205 aa		3.95	□□□□□ -1.78
PAPOLA-223	ENST00000557320	HMCN1	Q96RW7	5635 aa		3.93	□□□□□ -1.78
PAPOLA-223	ENST00000557320	KRTAP20-2	Q3LI61	65 aa		3.89	□□□□□ -1.79
PAPOLA-223	ENST00000557320	KRTAP5-3	Q6L8H2	238 aa		3.8	□□□□□ -1.8
PAPOLA-223	ENST00000557320	KRTAP9-4	Q9BYQ2	154 aa		3.75	□□□□□ -1.81
PAPOLA-223	ENST00000557320	KRTAP5-2	Q701N4	177 aa		3.73	□□□□□ -1.81
PAPOLA-223	ENST00000557320	AHNAK2	Q8IVF2	5795 aa		3.71	□□□□□ -1.81
PAPOLA-223	ENST00000557320	KRTAP5-10	Q6L8G5	202 aa		3.69	□□□□□ -1.82
PAPOLA-223	ENST00000557320	MUC19	Q7Z5P9	8384 aa		3.66	□□□□□ -1.82
PAPOLA-223	ENST00000557320	GPR98	Q8WXG9	6306 aa		3.64	□□□□□ -1.83
PAPOLA-223	ENST00000557320	LCE1F	Q5T754	118 aa		3.56	□□□□□ -1.84
PAPOLA-223	ENST00000557320	MT3	P25713	68 aa		3.55	□□□□□ -1.84
PAPOLA-223	ENST00000557320	KRTAP5-7	Q6L8G8	165 aa		3.52	□□□□□ -1.85
PAPOLA-223	ENST00000557320	KRTAP4-11	Q9BYQ6	195 aa		3.46	□□□□□ -1.86
PAPOLA-223	ENST00000557320	KRTAP5-8	O75690	187 aa		3.38	□□□□□ -1.87
PAPOLA-223	ENST00000557320	KRTAP5-1	Q6L8H4	278 aa		3.27	□□□□□ -1.89
PAPOLA-223	ENST00000557320	MUC5AC	P98088	5654 aa		3.11	□□□□□ -1.91
PAPOLA-223	ENST00000557320	KRTAP9-9	Q9BYP9	154 aa		3.1	□□□□□ -1.91
PAPOLA-223	ENST00000557320	KRTAP4-12	Q9BQ66	201 aa		3.05	□□□□□ -1.92
PAPOLA-223	ENST00000557320	LCE1B	Q5T7P3	118 aa		3.02	□□□□□ -1.93
PAPOLA-223	ENST00000557320	KRTAP4-2	Q9BYR5	136 aa		3.02	□□□□□ -1.93
PAPOLA-223	ENST00000557320	LCE1C	Q5T751	118 aa		3.01	□□□□□ -1.93
PAPOLA-223	ENST00000557320	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.97	□□□□□ -1.93
PAPOLA-223	ENST00000557320	AHNAK	Q09666	5890 aa	Known RBP	2.96	□□□□□ -1.94
PAPOLA-223	ENST00000557320	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.81	□□□□□ -1.96
PAPOLA-223	ENST00000557320	KRTAP21-1	Q3LI58	79 aa		2.77	□□□□□ -1.97
PAPOLA-223	ENST00000557320	KRTAP5-11	Q6L8G4	156 aa		2.71	□□□□□ -1.98
PAPOLA-223	ENST00000557320	KRTAP4-4	Q9BYR3	166 aa		2.62	□□□□□ -1.99
PAPOLA-223	ENST00000557320	KRTAP21-2	Q3LI59	83 aa		2.56	□□□□□ -2
PAPOLA-223	ENST00000557320	PHGR1	C9JFL3	82 aa		2.32	□□□□□ -2.04
PAPOLA-223	ENST00000557320	MUC16	Q8WXI7	14507 aa		1.51	□□□□□ -2.17

Retrieved 77 of 20,778 RNA–protein pairs in 140.7 ms