RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 KRTAP19-5Q3LI72 72 aa8.3□□□□□ -1.08
PABPN1-206ENST00000556809 LCE5AQ5TCM9 118 aa8.27□□□□□ -1.09
PABPN1-206ENST00000556809 KRTAP25-1Q3LHN0 102 aa8.26□□□□□ -1.09
PABPN1-206ENST00000556809 KRTAP19-3Q7Z4W3 81 aa8.24□□□□□ -1.09
PABPN1-206ENST00000556809 MT1GP13640 62 aa8.07□□□□□ -1.12
PABPN1-206ENST00000556809 ROMO1P60602 79 aa8.05□□□□□ -1.12
PABPN1-206ENST00000556809 KRTAP12-3P60328 96 aa8.02□□□□□ -1.13
PABPN1-206ENST00000556809 MT1LQ93083 61 aa8.01□□□□□ -1.13
PABPN1-206ENST00000556809 DSTQ03001 7570 aaKnown RBP7.99□□□□□ -1.13
PABPN1-206ENST00000556809 KRTAP23-1A1A580 65 aa7.97□□□□□ -1.13
PABPN1-206ENST00000556809 PP632Q6XCG6 107 aa7.95□□□□□ -1.14
PABPN1-206ENST00000556809 MT1MQ8N339 61 aa7.94□□□□□ -1.14
PABPN1-206ENST00000556809 BRK1Q8WUW1 75 aa7.87□□□□□ -1.15
PABPN1-206ENST00000556809 KRTAP4-3Q9BYR4 195 aa7.75□□□□□ -1.17
PABPN1-206ENST00000556809 KRTAP4-9Q9BYQ8 210 aa7.71□□□□□ -1.18
PABPN1-206ENST00000556809 KRTAP15-1Q3LI76 137 aa7.64□□□□□ -1.19
PABPN1-206ENST00000556809 KRTAP4-7Q9BYR0 210 aa7.64□□□□□ -1.19
PABPN1-206ENST00000556809 LCE4AQ5TA78 99 aa7.6□□□□□ -1.19
PABPN1-206ENST00000556809 GPR98Q8WXG9 6306 aa7.6□□□□□ -1.19
PABPN1-206ENST00000556809 KRTAP19-4Q3LI73 84 aa7.58□□□□□ -1.2
PABPN1-206ENST00000556809 LCE1DQ5T752 114 aa7.56□□□□□ -1.2
PABPN1-206ENST00000556809 KRTAP5-4Q6L8H1 288 aa7.53□□□□□ -1.2
PABPN1-206ENST00000556809 MT4P47944 62 aa7.47□□□□□ -1.21
PABPN1-206ENST00000556809 LCE3CQ5T5A8 94 aa7.42□□□□□ -1.22
PABPN1-206ENST00000556809 PMAIP1Q13794 54 aa7.41□□□□□ -1.22
PABPN1-206ENST00000556809 HMCN1Q96RW7 5635 aa7.37□□□□□ -1.23
PABPN1-206ENST00000556809 KRTAP4-6Q9BYQ5 205 aa7.32□□□□□ -1.24
PABPN1-206ENST00000556809 KRTAP5-5Q701N2 237 aaPredicted RBP7.31□□□□□ -1.24
PABPN1-206ENST00000556809 PRO0628Q9UI54 55 aa7.23□□□□□ -1.25
PABPN1-206ENST00000556809 LOC100996750A0A140TA64 210 aa7.21□□□□□ -1.26
PABPN1-206ENST00000556809 KRTAP20-2Q3LI61 65 aa7.06□□□□□ -1.28
PABPN1-206ENST00000556809 SPRR5A0A1B0GTR4 108 aa7.05□□□□□ -1.28
PABPN1-206ENST00000556809 PRAC1Q96KF2 57 aa7.05□□□□□ -1.28
PABPN1-206ENST00000556809 AHNAK2Q8IVF2 5795 aa7.05□□□□□ -1.28
PABPN1-206ENST00000556809 KRTAP12-4P60329 112 aa7□□□□□ -1.29
PABPN1-206ENST00000556809 KRTAP9-6A8MVA2 160 aa6.99□□□□□ -1.29
PABPN1-206ENST00000556809 KRTAP5-10Q6L8G5 202 aa6.99□□□□□ -1.29
PABPN1-206ENST00000556809 SVIPQ8NHG7 77 aa6.96□□□□□ -1.3
PABPN1-206ENST00000556809 SYNE1Q8NF91 8797 aaKnown RBP6.96□□□□□ -1.3
PABPN1-206ENST00000556809 KRTAP5-3Q6L8H2 238 aa6.89□□□□□ -1.31
PABPN1-206ENST00000556809 MT1AP04731 61 aa6.83□□□□□ -1.32
PABPN1-206ENST00000556809 KTN1-AS1Q86SY8 53 aa6.82□□□□□ -1.32
PABPN1-206ENST00000556809 KRTAP6-1Q3LI64 71 aa6.76□□□□□ -1.33
PABPN1-206ENST00000556809 KRTAP5-7Q6L8G8 165 aa6.69□□□□□ -1.34
PABPN1-206ENST00000556809 KRTAP5-2Q701N4 177 aa6.62□□□□□ -1.35
PABPN1-206ENST00000556809 KRTAP9-4Q9BYQ2 154 aa6.57□□□□□ -1.36
PABPN1-206ENST00000556809 KRTAP6-2Q3LI66 62 aa6.42□□□□□ -1.38
PABPN1-206ENST00000556809 KRTAP4-11Q9BYQ6 195 aa6.41□□□□□ -1.38
PABPN1-206ENST00000556809 KRTAP5-8O75690 187 aa6.22□□□□□ -1.41
PABPN1-206ENST00000556809 MT3P25713 68 aa6.22□□□□□ -1.41
PABPN1-206ENST00000556809 H3BS24 57 aa6.19□□□□□ -1.42
PABPN1-206ENST00000556809 OBSCNQ5VST9 7968 aa6.04□□□□□ -1.44
PABPN1-206ENST00000556809 KRTAP5-1Q6L8H4 278 aa5.91□□□□□ -1.46
PABPN1-206ENST00000556809 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
PABPN1-206ENST00000556809 KRTAP9-9Q9BYP9 154 aa5.81□□□□□ -1.48
PABPN1-206ENST00000556809 MUC5BQ9HC84 5762 aaPredicted RBP5.77□□□□□ -1.49
PABPN1-206ENST00000556809 AHNAKQ09666 5890 aaKnown RBP5.77□□□□□ -1.49
PABPN1-206ENST00000556809 MUC5ACP98088 5654 aa5.74□□□□□ -1.49
PABPN1-206ENST00000556809 LCE1EQ5T753 118 aa5.69□□□□□ -1.5
PABPN1-206ENST00000556809 LCE3DQ9BYE3 92 aa5.44□□□□□ -1.54
PABPN1-206ENST00000556809 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
PABPN1-206ENST00000556809 LCE1BQ5T7P3 118 aa5.29□□□□□ -1.56
PABPN1-206ENST00000556809 LCE1CQ5T751 118 aa5.28□□□□□ -1.56
PABPN1-206ENST00000556809 A0A0A0MQY5 61 aa5.22□□□□□ -1.57
PABPN1-206ENST00000556809 LCE3EQ5T5B0 92 aa5.19□□□□□ -1.58
PABPN1-206ENST00000556809 NDUFAF8A1L188 74 aa5.12□□□□□ -1.59
PABPN1-206ENST00000556809 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.85□□□□□ -1.63
PABPN1-206ENST00000556809 KRTAP4-12Q9BQ66 201 aa4.79□□□□□ -1.64
PABPN1-206ENST00000556809 KRTAP5-11Q6L8G4 156 aa4.77□□□□□ -1.65
PABPN1-206ENST00000556809 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
PABPN1-206ENST00000556809 KRTAP21-2Q3LI59 83 aa4.49□□□□□ -1.69
PABPN1-206ENST00000556809 INE1O15225 51 aa4.19□□□□□ -1.74
PABPN1-206ENST00000556809 PRM1P04553 51 aa4.15□□□□□ -1.75
PABPN1-206ENST00000556809 PHGR1C9JFL3 82 aa4.13□□□□□ -1.75
PABPN1-206ENST00000556809 KRTAP4-4Q9BYR3 166 aa4.04□□□□□ -1.76
PABPN1-206ENST00000556809 MUC19Q7Z5P9 8384 aa3.74□□□□□ -1.81
PABPN1-206ENST00000556809 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
PABPN1-206ENST00000556809 MUC16Q8WXI7 14507 aa2.64□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms