RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 PRR15LQ9BU68 103 aa3.75□□□□□ -1.81
SPTLC2-205ENST00000556607 C10orf95Q9H7T3 257 aa3.75□□□□□ -1.81
SPTLC2-205ENST00000556607 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
SPTLC2-205ENST00000556607 MT1LQ93083 61 aa3.74□□□□□ -1.81
SPTLC2-205ENST00000556607 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
SPTLC2-205ENST00000556607 MT4P47944 62 aa3.73□□□□□ -1.81
SPTLC2-205ENST00000556607 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
SPTLC2-205ENST00000556607 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
SPTLC2-205ENST00000556607 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
SPTLC2-205ENST00000556607 CCDC179H3BU77 68 aa3.67□□□□□ -1.82
SPTLC2-205ENST00000556607 ATP5EP56381 51 aaPredicted RBP3.65□□□□□ -1.83
SPTLC2-205ENST00000556607 LINC01558Q9Y6Z2 57 aa3.64□□□□□ -1.83
SPTLC2-205ENST00000556607 UQCR11O14957 56 aa3.6□□□□□ -1.83
SPTLC2-205ENST00000556607 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
SPTLC2-205ENST00000556607 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.83
SPTLC2-205ENST00000556607 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
SPTLC2-205ENST00000556607 KRTAP15-1Q3LI76 137 aa3.57□□□□□ -1.84
SPTLC2-205ENST00000556607 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
SPTLC2-205ENST00000556607 TMEM258P61165 79 aa3.52□□□□□ -1.85
SPTLC2-205ENST00000556607 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
SPTLC2-205ENST00000556607 K7ERS5 55 aa3.5□□□□□ -1.85
SPTLC2-205ENST00000556607 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
SPTLC2-205ENST00000556607 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
SPTLC2-205ENST00000556607 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
SPTLC2-205ENST00000556607 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
SPTLC2-205ENST00000556607 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
SPTLC2-205ENST00000556607 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
SPTLC2-205ENST00000556607 PSPHP1O15172 72 aa3.41□□□□□ -1.86
SPTLC2-205ENST00000556607 KRTAP12-4P60329 112 aa3.41□□□□□ -1.86
SPTLC2-205ENST00000556607 KRTAP5-3Q6L8H2 238 aa3.41□□□□□ -1.86
SPTLC2-205ENST00000556607 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
SPTLC2-205ENST00000556607 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
SPTLC2-205ENST00000556607 V9GYY9 64 aa3.38□□□□□ -1.87
SPTLC2-205ENST00000556607 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
SPTLC2-205ENST00000556607 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
SPTLC2-205ENST00000556607 Q1T7F1 81 aa3.32□□□□□ -1.88
SPTLC2-205ENST00000556607 A6NED7 52 aa3.3□□□□□ -1.88
SPTLC2-205ENST00000556607 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
SPTLC2-205ENST00000556607 CDC42SE1Q9NRR8 79 aa3.28□□□□□ -1.88
SPTLC2-205ENST00000556607 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
SPTLC2-205ENST00000556607 ROMO1P60602 79 aa3.2□□□□□ -1.9
SPTLC2-205ENST00000556607 MT1AP04731 61 aa3.18□□□□□ -1.9
SPTLC2-205ENST00000556607 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
SPTLC2-205ENST00000556607 KRTAP4-11Q9BYQ6 195 aa3.16□□□□□ -1.9
SPTLC2-205ENST00000556607 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
SPTLC2-205ENST00000556607 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
SPTLC2-205ENST00000556607 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
SPTLC2-205ENST00000556607 PRAC1Q96KF2 57 aa3.08□□□□□ -1.92
SPTLC2-205ENST00000556607 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
SPTLC2-205ENST00000556607 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
SPTLC2-205ENST00000556607 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
SPTLC2-205ENST00000556607 MT3P25713 68 aa2.94□□□□□ -1.94
SPTLC2-205ENST00000556607 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
SPTLC2-205ENST00000556607 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
SPTLC2-205ENST00000556607 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
SPTLC2-205ENST00000556607 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
SPTLC2-205ENST00000556607 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
SPTLC2-205ENST00000556607 BRK1Q8WUW1 75 aa2.73□□□□□ -1.97
SPTLC2-205ENST00000556607 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
SPTLC2-205ENST00000556607 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
SPTLC2-205ENST00000556607 LCE1FQ5T754 118 aa2.56□□□□□ -2
SPTLC2-205ENST00000556607 PMAIP1Q13794 54 aa2.55□□□□□ -2
SPTLC2-205ENST00000556607 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
SPTLC2-205ENST00000556607 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
SPTLC2-205ENST00000556607 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
SPTLC2-205ENST00000556607 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
SPTLC2-205ENST00000556607 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
SPTLC2-205ENST00000556607 PRO0628Q9UI54 55 aa2.21□□□□□ -2.06
SPTLC2-205ENST00000556607 LUZP6Q538Z0 58 aa2.16□□□□□ -2.06
SPTLC2-205ENST00000556607 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
SPTLC2-205ENST00000556607 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
SPTLC2-205ENST00000556607 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
SPTLC2-205ENST00000556607 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
SPTLC2-205ENST00000556607 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
SPTLC2-205ENST00000556607 PRM1P04553 51 aa1.64□□□□□ -2.15
SPTLC2-205ENST00000556607 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
SPTLC2-205ENST00000556607 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
SPTLC2-205ENST00000556607 INE1O15225 51 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 10 ms