RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 SPRR2DP22532 72 aa6.58□□□□□ -1.36
TUBB3-211ENST00000556536 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
TUBB3-211ENST00000556536 KRTAP19-5Q3LI72 72 aa6.49□□□□□ -1.37
TUBB3-211ENST00000556536 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
TUBB3-211ENST00000556536 MT1EP04732 61 aa6.43□□□□□ -1.38
TUBB3-211ENST00000556536 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
TUBB3-211ENST00000556536 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
TUBB3-211ENST00000556536 PMAIP1Q13794 54 aa6.32□□□□□ -1.4
TUBB3-211ENST00000556536 PRO0628Q9UI54 55 aa6.29□□□□□ -1.4
TUBB3-211ENST00000556536 DSTQ03001 7570 aaKnown RBP6.27□□□□□ -1.41
TUBB3-211ENST00000556536 KRTAP19-3Q7Z4W3 81 aa6.25□□□□□ -1.41
TUBB3-211ENST00000556536 PP632Q6XCG6 107 aa6.24□□□□□ -1.41
TUBB3-211ENST00000556536 MT1LQ93083 61 aa6.23□□□□□ -1.41
TUBB3-211ENST00000556536 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
TUBB3-211ENST00000556536 MT1GP13640 62 aa6.14□□□□□ -1.43
TUBB3-211ENST00000556536 KRTAP4-9Q9BYQ8 210 aa6.12□□□□□ -1.43
TUBB3-211ENST00000556536 MT1MQ8N339 61 aa6.08□□□□□ -1.44
TUBB3-211ENST00000556536 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
TUBB3-211ENST00000556536 PRAC1Q96KF2 57 aa6.02□□□□□ -1.45
TUBB3-211ENST00000556536 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
TUBB3-211ENST00000556536 KRTAP4-3Q9BYR4 195 aa5.97□□□□□ -1.45
TUBB3-211ENST00000556536 LCE1DQ5T752 114 aa5.93□□□□□ -1.46
TUBB3-211ENST00000556536 HMCN1Q96RW7 5635 aa5.92□□□□□ -1.46
TUBB3-211ENST00000556536 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
TUBB3-211ENST00000556536 AHNAK2Q8IVF2 5795 aa5.91□□□□□ -1.46
TUBB3-211ENST00000556536 KTN1-AS1Q86SY8 53 aa5.9□□□□□ -1.46
TUBB3-211ENST00000556536 LCE3CQ5T5A8 94 aa5.87□□□□□ -1.47
TUBB3-211ENST00000556536 KRTAP5-10Q6L8G5 202 aa5.87□□□□□ -1.47
TUBB3-211ENST00000556536 LCE4AQ5TA78 99 aa5.79□□□□□ -1.48
TUBB3-211ENST00000556536 MT4P47944 62 aa5.78□□□□□ -1.48
TUBB3-211ENST00000556536 KRTAP5-7Q6L8G8 165 aa5.74□□□□□ -1.49
TUBB3-211ENST00000556536 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.5
TUBB3-211ENST00000556536 SVIPQ8NHG7 77 aa5.64□□□□□ -1.51
TUBB3-211ENST00000556536 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
TUBB3-211ENST00000556536 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
TUBB3-211ENST00000556536 KRTAP5-4Q6L8H1 288 aa5.57□□□□□ -1.52
TUBB3-211ENST00000556536 KRTAP4-6Q9BYQ5 205 aa5.55□□□□□ -1.52
TUBB3-211ENST00000556536 KRTAP5-3Q6L8H2 238 aa5.54□□□□□ -1.52
TUBB3-211ENST00000556536 KRTAP5-5Q701N2 237 aaPredicted RBP5.53□□□□□ -1.52
TUBB3-211ENST00000556536 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
TUBB3-211ENST00000556536 MT1AP04731 61 aa5.29□□□□□ -1.56
TUBB3-211ENST00000556536 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
TUBB3-211ENST00000556536 KRTAP6-1Q3LI64 71 aa5.26□□□□□ -1.57
TUBB3-211ENST00000556536 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
TUBB3-211ENST00000556536 AHNAKQ09666 5890 aaKnown RBP5.16□□□□□ -1.58
TUBB3-211ENST00000556536 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
TUBB3-211ENST00000556536 MUC5ACP98088 5654 aa5.06□□□□□ -1.6
TUBB3-211ENST00000556536 MUC5BQ9HC84 5762 aaPredicted RBP4.99□□□□□ -1.61
TUBB3-211ENST00000556536 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
TUBB3-211ENST00000556536 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
TUBB3-211ENST00000556536 LUZP6Q538Z0 58 aa4.91□□□□□ -1.62
TUBB3-211ENST00000556536 KRTAP5-2Q701N4 177 aa4.9□□□□□ -1.63
TUBB3-211ENST00000556536 KRTAP5-8O75690 187 aa4.82□□□□□ -1.64
TUBB3-211ENST00000556536 MT3P25713 68 aa4.81□□□□□ -1.64
TUBB3-211ENST00000556536 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
TUBB3-211ENST00000556536 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
TUBB3-211ENST00000556536 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
TUBB3-211ENST00000556536 KRTAP5-1Q6L8H4 278 aa4.39□□□□□ -1.71
TUBB3-211ENST00000556536 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
TUBB3-211ENST00000556536 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
TUBB3-211ENST00000556536 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
TUBB3-211ENST00000556536 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
TUBB3-211ENST00000556536 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
TUBB3-211ENST00000556536 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
TUBB3-211ENST00000556536 H3BS24 57 aa3.83□□□□□ -1.8
TUBB3-211ENST00000556536 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
TUBB3-211ENST00000556536 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
TUBB3-211ENST00000556536 INE1O15225 51 aa3.66□□□□□ -1.82
TUBB3-211ENST00000556536 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
TUBB3-211ENST00000556536 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
TUBB3-211ENST00000556536 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
TUBB3-211ENST00000556536 PHGR1C9JFL3 82 aa3.45□□□□□ -1.86
TUBB3-211ENST00000556536 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
TUBB3-211ENST00000556536 PRM1P04553 51 aa3.42□□□□□ -1.86
TUBB3-211ENST00000556536 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
TUBB3-211ENST00000556536 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
TUBB3-211ENST00000556536 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
TUBB3-211ENST00000556536 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 77 ms