RNA–Protein interactions for RNA: ENST00000556226.5

HNRNPC-224, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-224ENST00000556226 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
HNRNPC-224ENST00000556226 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
HNRNPC-224ENST00000556226 SMIM26A0A096LP01 95 aa3.61□□□□□ -1.83
HNRNPC-224ENST00000556226 A8MU10 97 aa3.59□□□□□ -1.83
HNRNPC-224ENST00000556226 LINC01558Q9Y6Z2 57 aa3.57□□□□□ -1.84
HNRNPC-224ENST00000556226 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
HNRNPC-224ENST00000556226 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
HNRNPC-224ENST00000556226 MT1GP13640 62 aa3.56□□□□□ -1.84
HNRNPC-224ENST00000556226 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
HNRNPC-224ENST00000556226 MT4P47944 62 aa3.54□□□□□ -1.84
HNRNPC-224ENST00000556226 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
HNRNPC-224ENST00000556226 TNP1P09430 55 aa3.5□□□□□ -1.85
HNRNPC-224ENST00000556226 C10orf95Q9H7T3 257 aa3.49□□□□□ -1.85
HNRNPC-224ENST00000556226 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
HNRNPC-224ENST00000556226 UQCR11O14957 56 aa3.48□□□□□ -1.85
HNRNPC-224ENST00000556226 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
HNRNPC-224ENST00000556226 MT1MQ8N339 61 aa3.46□□□□□ -1.86
HNRNPC-224ENST00000556226 MT1LQ93083 61 aa3.46□□□□□ -1.86
HNRNPC-224ENST00000556226 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
HNRNPC-224ENST00000556226 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
HNRNPC-224ENST00000556226 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
HNRNPC-224ENST00000556226 MIR22HGQ0VDD5 57 aa3.42□□□□□ -1.86
HNRNPC-224ENST00000556226 V9GYY9 64 aa3.42□□□□□ -1.86
HNRNPC-224ENST00000556226 PSPHP1O15172 72 aa3.41□□□□□ -1.86
HNRNPC-224ENST00000556226 Q1T7F1 81 aa3.38□□□□□ -1.87
HNRNPC-224ENST00000556226 K7ERS5 55 aa3.36□□□□□ -1.87
HNRNPC-224ENST00000556226 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
HNRNPC-224ENST00000556226 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
HNRNPC-224ENST00000556226 PCP4P48539 62 aa3.34□□□□□ -1.87
HNRNPC-224ENST00000556226 KRTAP5-3Q6L8H2 238 aa3.33□□□□□ -1.88
HNRNPC-224ENST00000556226 A6NED7 52 aa3.32□□□□□ -1.88
HNRNPC-224ENST00000556226 KRTAP25-1Q3LHN0 102 aa3.29□□□□□ -1.88
HNRNPC-224ENST00000556226 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
HNRNPC-224ENST00000556226 RPS28P62857 69 aaKnown RBP3.24□□□□□ -1.89
HNRNPC-224ENST00000556226 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
HNRNPC-224ENST00000556226 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
HNRNPC-224ENST00000556226 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
HNRNPC-224ENST00000556226 CDC42SE1Q9NRR8 79 aa3.19□□□□□ -1.9
HNRNPC-224ENST00000556226 KRTAP15-1Q3LI76 137 aa3.18□□□□□ -1.9
HNRNPC-224ENST00000556226 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
HNRNPC-224ENST00000556226 ROMO1P60602 79 aa3.12□□□□□ -1.91
HNRNPC-224ENST00000556226 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
HNRNPC-224ENST00000556226 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
HNRNPC-224ENST00000556226 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
HNRNPC-224ENST00000556226 MT1AP04731 61 aa2.96□□□□□ -1.94
HNRNPC-224ENST00000556226 BRK1Q8WUW1 75 aa2.95□□□□□ -1.94
HNRNPC-224ENST00000556226 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
HNRNPC-224ENST00000556226 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
HNRNPC-224ENST00000556226 AHNAKQ09666 5890 aaKnown RBP2.93□□□□□ -1.94
HNRNPC-224ENST00000556226 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
HNRNPC-224ENST00000556226 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
HNRNPC-224ENST00000556226 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
HNRNPC-224ENST00000556226 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
HNRNPC-224ENST00000556226 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
HNRNPC-224ENST00000556226 PMAIP1Q13794 54 aa2.74□□□□□ -1.97
HNRNPC-224ENST00000556226 MT3P25713 68 aa2.73□□□□□ -1.97
HNRNPC-224ENST00000556226 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
HNRNPC-224ENST00000556226 PRAC1Q96KF2 57 aa2.66□□□□□ -1.98
HNRNPC-224ENST00000556226 PRO0628Q9UI54 55 aa2.6□□□□□ -1.99
HNRNPC-224ENST00000556226 LCE1EQ5T753 118 aa2.53□□□□□ -2
HNRNPC-224ENST00000556226 KTN1-AS1Q86SY8 53 aa2.49□□□□□ -2.01
HNRNPC-224ENST00000556226 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
HNRNPC-224ENST00000556226 NDUFAF8A1L188 74 aa2.43□□□□□ -2.02
HNRNPC-224ENST00000556226 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
HNRNPC-224ENST00000556226 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
HNRNPC-224ENST00000556226 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
HNRNPC-224ENST00000556226 LCE1FQ5T754 118 aa2.34□□□□□ -2.03
HNRNPC-224ENST00000556226 LUZP6Q538Z0 58 aa2.23□□□□□ -2.05
HNRNPC-224ENST00000556226 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
HNRNPC-224ENST00000556226 LCE3EQ5T5B0 92 aa2.09□□□□□ -2.07
HNRNPC-224ENST00000556226 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
HNRNPC-224ENST00000556226 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
HNRNPC-224ENST00000556226 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
HNRNPC-224ENST00000556226 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
HNRNPC-224ENST00000556226 PRM1P04553 51 aa1.62□□□□□ -2.15
HNRNPC-224ENST00000556226 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
HNRNPC-224ENST00000556226 INE1O15225 51 aa1.48□□□□□ -2.17
HNRNPC-224ENST00000556226 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 62.1 ms