RNA–Protein interactions for RNA: ENST00000556184.5

SRSF5-212, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 2,443 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-212ENST00000556184 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
SRSF5-212ENST00000556184 KRTAP10-12P60413 245 aa4.12□□□□□ -1.75
SRSF5-212ENST00000556184 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
SRSF5-212ENST00000556184 MT2AP02795 61 aa4.11□□□□□ -1.75
SRSF5-212ENST00000556184 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
SRSF5-212ENST00000556184 KRTAP10-5P60370 271 aa4.09□□□□□ -1.76
SRSF5-212ENST00000556184 MT1XP80297 61 aa4.06□□□□□ -1.76
SRSF5-212ENST00000556184 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
SRSF5-212ENST00000556184 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
SRSF5-212ENST00000556184 MT1BP07438 61 aa4.02□□□□□ -1.77
SRSF5-212ENST00000556184 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
SRSF5-212ENST00000556184 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
SRSF5-212ENST00000556184 SSPOA2VEC9 5147 aa3.91□□□□□ -1.78
SRSF5-212ENST00000556184 CRCT1Q9UGL9 99 aa3.84□□□□□ -1.8
SRSF5-212ENST00000556184 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
SRSF5-212ENST00000556184 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
SRSF5-212ENST00000556184 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
SRSF5-212ENST00000556184 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
SRSF5-212ENST00000556184 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
SRSF5-212ENST00000556184 FCGBPQ9Y6R7 5405 aaPredicted RBP3.78□□□□□ -1.8
SRSF5-212ENST00000556184 KMT2DO14686 5537 aa3.76□□□□□ -1.81
SRSF5-212ENST00000556184 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
SRSF5-212ENST00000556184 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
SRSF5-212ENST00000556184 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
SRSF5-212ENST00000556184 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.82
SRSF5-212ENST00000556184 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
SRSF5-212ENST00000556184 KRTAP19-6Q3LI70 58 aa3.61□□□□□ -1.83
SRSF5-212ENST00000556184 MT1LQ93083 61 aa3.54□□□□□ -1.84
SRSF5-212ENST00000556184 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
SRSF5-212ENST00000556184 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
SRSF5-212ENST00000556184 MT1EP04732 61 aa3.5□□□□□ -1.85
SRSF5-212ENST00000556184 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
SRSF5-212ENST00000556184 KRTAP5-3Q6L8H2 238 aa3.44□□□□□ -1.86
SRSF5-212ENST00000556184 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
SRSF5-212ENST00000556184 SPRR2FQ96RM1 72 aa3.32□□□□□ -1.88
SRSF5-212ENST00000556184 NEBP20929 6669 aa3.29□□□□□ -1.88
SRSF5-212ENST00000556184 MT1GP13640 62 aa3.27□□□□□ -1.89
SRSF5-212ENST00000556184 MT1MQ8N339 61 aa3.24□□□□□ -1.89
SRSF5-212ENST00000556184 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
SRSF5-212ENST00000556184 MT1AP04731 61 aa3.23□□□□□ -1.89
SRSF5-212ENST00000556184 KRTAP19-3Q7Z4W3 81 aa3.23□□□□□ -1.89
SRSF5-212ENST00000556184 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
SRSF5-212ENST00000556184 DSTQ03001 7570 aaKnown RBP3.22□□□□□ -1.89
SRSF5-212ENST00000556184 SPRR2EP22531 72 aa3.2□□□□□ -1.9
SRSF5-212ENST00000556184 SPRR2BP35325 72 aa3.2□□□□□ -1.9
SRSF5-212ENST00000556184 SPRR2AP35326 72 aa3.2□□□□□ -1.9
SRSF5-212ENST00000556184 SPRR2DP22532 72 aa3.07□□□□□ -1.92
SRSF5-212ENST00000556184 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.92
SRSF5-212ENST00000556184 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.92
SRSF5-212ENST00000556184 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
SRSF5-212ENST00000556184 PRM1P04553 51 aa2.99□□□□□ -1.93
SRSF5-212ENST00000556184 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
SRSF5-212ENST00000556184 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
SRSF5-212ENST00000556184 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
SRSF5-212ENST00000556184 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
SRSF5-212ENST00000556184 MT4P47944 62 aa2.77□□□□□ -1.97
SRSF5-212ENST00000556184 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
SRSF5-212ENST00000556184 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
SRSF5-212ENST00000556184 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
SRSF5-212ENST00000556184 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
SRSF5-212ENST00000556184 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.01
SRSF5-212ENST00000556184 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
SRSF5-212ENST00000556184 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
SRSF5-212ENST00000556184 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
SRSF5-212ENST00000556184 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
SRSF5-212ENST00000556184 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
SRSF5-212ENST00000556184 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
SRSF5-212ENST00000556184 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
SRSF5-212ENST00000556184 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
SRSF5-212ENST00000556184 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
SRSF5-212ENST00000556184 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
SRSF5-212ENST00000556184 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
SRSF5-212ENST00000556184 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
SRSF5-212ENST00000556184 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
SRSF5-212ENST00000556184 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
SRSF5-212ENST00000556184 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
SRSF5-212ENST00000556184 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
SRSF5-212ENST00000556184 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms