RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907		K7ERS5	55 aa		4.69	□□□□□ -1.66
RAD51B-222	ENST00000555907	SPRR2E	P22531	72 aa		4.68	□□□□□ -1.66
RAD51B-222	ENST00000555907	SPRR2B	P35325	72 aa		4.68	□□□□□ -1.66
RAD51B-222	ENST00000555907	SPRR2A	P35326	72 aa		4.68	□□□□□ -1.66
RAD51B-222	ENST00000555907	SPRR2F	Q96RM1	72 aa		4.65	□□□□□ -1.67
RAD51B-222	ENST00000555907	KRTAP5-3	Q6L8H2	238 aa		4.63	□□□□□ -1.67
RAD51B-222	ENST00000555907	BRK1	Q8WUW1	75 aa		4.6	□□□□□ -1.67
RAD51B-222	ENST00000555907	KRTAP2-2	Q9BYT5	123 aa		4.59	□□□□□ -1.67
RAD51B-222	ENST00000555907	KRTAP2-1	Q9BYU5	128 aa		4.59	□□□□□ -1.67
RAD51B-222	ENST00000555907	C10orf95	Q9H7T3	257 aa		4.56	□□□□□ -1.68
RAD51B-222	ENST00000555907	KRTAP15-1	Q3LI76	137 aa		4.54	□□□□□ -1.68
RAD51B-222	ENST00000555907	SPRR2D	P22532	72 aa		4.52	□□□□□ -1.69
RAD51B-222	ENST00000555907	KRTAP10-12	P60413	245 aa		4.5	□□□□□ -1.69
RAD51B-222	ENST00000555907	LCE1A	Q5T7P2	110 aa		4.5	□□□□□ -1.69
RAD51B-222	ENST00000555907	KRTAP8-1	Q8IUC2	63 aa		4.49	□□□□□ -1.69
RAD51B-222	ENST00000555907	KRTAP10-7	P60409	375 aa	Predicted RBP	4.48	□□□□□ -1.69
RAD51B-222	ENST00000555907	TNP1	P09430	55 aa		4.47	□□□□□ -1.69
RAD51B-222	ENST00000555907	ROMO1	P60602	79 aa		4.46	□□□□□ -1.7
RAD51B-222	ENST00000555907	PRO0628	Q9UI54	55 aa		4.45	□□□□□ -1.7
RAD51B-222	ENST00000555907	KRTAP25-1	Q3LHN0	102 aa		4.44	□□□□□ -1.7
RAD51B-222	ENST00000555907	GPR98	Q8WXG9	6306 aa		4.4	□□□□□ -1.71
RAD51B-222	ENST00000555907	PMAIP1	Q13794	54 aa		4.37	□□□□□ -1.71
RAD51B-222	ENST00000555907	LCE3A	Q5TA76	89 aa		4.28	□□□□□ -1.72
RAD51B-222	ENST00000555907	PP632	Q6XCG6	107 aa		4.25	□□□□□ -1.73
RAD51B-222	ENST00000555907	KRTAP19-7	Q3SYF9	63 aa		4.21	□□□□□ -1.74
RAD51B-222	ENST00000555907	DST	Q03001	7570 aa	Known RBP	4.2	□□□□□ -1.74
RAD51B-222	ENST00000555907	KRTAP19-5	Q3LI72	72 aa		4.19	□□□□□ -1.74
RAD51B-222	ENST00000555907	KRTAP12-3	P60328	96 aa		4.15	□□□□□ -1.75
RAD51B-222	ENST00000555907	MT1E	P04732	61 aa		4.14	□□□□□ -1.75
RAD51B-222	ENST00000555907	KTN1-AS1	Q86SY8	53 aa		4.12	□□□□□ -1.75
RAD51B-222	ENST00000555907	PRAC1	Q96KF2	57 aa		4.07	□□□□□ -1.76
RAD51B-222	ENST00000555907	KRTAP19-3	Q7Z4W3	81 aa		4.03	□□□□□ -1.76
RAD51B-222	ENST00000555907	MT1L	Q93083	61 aa		4.03	□□□□□ -1.76
RAD51B-222	ENST00000555907	MT4	P47944	62 aa		4.02	□□□□□ -1.77
RAD51B-222	ENST00000555907	MT1G	P13640	62 aa		4.01	□□□□□ -1.77
RAD51B-222	ENST00000555907	HMCN1	Q96RW7	5635 aa		3.98	□□□□□ -1.77
RAD51B-222	ENST00000555907	AHNAK2	Q8IVF2	5795 aa		3.96	□□□□□ -1.78
RAD51B-222	ENST00000555907	KRTAP5-10	Q6L8G5	202 aa		3.91	□□□□□ -1.78
RAD51B-222	ENST00000555907	MT1M	Q8N339	61 aa		3.91	□□□□□ -1.78
RAD51B-222	ENST00000555907	LCE3C	Q5T5A8	94 aa		3.87	□□□□□ -1.79
RAD51B-222	ENST00000555907	SPRR5	A0A1B0GTR4	108 aa		3.81	□□□□□ -1.8
RAD51B-222	ENST00000555907	KRTAP5-7	Q6L8G8	165 aa		3.79	□□□□□ -1.8
RAD51B-222	ENST00000555907	KRTAP4-3	Q9BYR4	195 aa		3.78	□□□□□ -1.8
RAD51B-222	ENST00000555907	KRTAP5-4	Q6L8H1	288 aa		3.72	□□□□□ -1.81
RAD51B-222	ENST00000555907	KRTAP9-6	A8MVA2	160 aa		3.63	□□□□□ -1.83
RAD51B-222	ENST00000555907	LUZP6	Q538Z0	58 aa		3.61	□□□□□ -1.83
RAD51B-222	ENST00000555907	KRTAP20-2	Q3LI61	65 aa		3.6	□□□□□ -1.83
RAD51B-222	ENST00000555907	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.58	□□□□□ -1.84
RAD51B-222	ENST00000555907	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.52	□□□□□ -1.85
RAD51B-222	ENST00000555907	MT3	P25713	68 aa		3.46	□□□□□ -1.86
RAD51B-222	ENST00000555907	KRTAP12-4	P60329	112 aa		3.46	□□□□□ -1.86
RAD51B-222	ENST00000555907	SYNE1	Q8NF91	8797 aa	Known RBP	3.45	□□□□□ -1.86
RAD51B-222	ENST00000555907	MT1A	P04731	61 aa		3.44	□□□□□ -1.86
RAD51B-222	ENST00000555907	KRTAP5-11	Q6L8G4	156 aa		3.42	□□□□□ -1.86
RAD51B-222	ENST00000555907	NDUFAF8	A1L188	74 aa		3.38	□□□□□ -1.87
RAD51B-222	ENST00000555907	KRTAP6-1	Q3LI64	71 aa		3.38	□□□□□ -1.87
RAD51B-222	ENST00000555907	LCE1E	Q5T753	118 aa		3.34	□□□□□ -1.87
RAD51B-222	ENST00000555907	AHNAK	Q09666	5890 aa	Known RBP	3.34	□□□□□ -1.88
RAD51B-222	ENST00000555907	KRTAP5-8	O75690	187 aa		3.3	□□□□□ -1.88
RAD51B-222	ENST00000555907	MUC5AC	P98088	5654 aa		3.3	□□□□□ -1.88
RAD51B-222	ENST00000555907	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.28	□□□□□ -1.88
RAD51B-222	ENST00000555907	KRTAP5-2	Q701N4	177 aa		3.23	□□□□□ -1.89
RAD51B-222	ENST00000555907	LCE1F	Q5T754	118 aa		3.17	□□□□□ -1.9
RAD51B-222	ENST00000555907	KRTAP6-2	Q3LI66	62 aa		3.14	□□□□□ -1.91
RAD51B-222	ENST00000555907	OBSCN	Q5VST9	7968 aa		3.13	□□□□□ -1.91
RAD51B-222	ENST00000555907	KRTAP5-1	Q6L8H4	278 aa		3	□□□□□ -1.93
RAD51B-222	ENST00000555907	KRTAP4-4	Q9BYR3	166 aa		2.88	□□□□□ -1.95
RAD51B-222	ENST00000555907	LCE3D	Q9BYE3	92 aa		2.87	□□□□□ -1.95
RAD51B-222	ENST00000555907	LCE3E	Q5T5B0	92 aa		2.77	□□□□□ -1.97
RAD51B-222	ENST00000555907	INE1	O15225	51 aa		2.68	□□□□□ -1.98
RAD51B-222	ENST00000555907	LCE1B	Q5T7P3	118 aa		2.68	□□□□□ -1.98
RAD51B-222	ENST00000555907	LCE1C	Q5T751	118 aa		2.61	□□□□□ -1.99
RAD51B-222	ENST00000555907	PHGR1	C9JFL3	82 aa		2.35	□□□□□ -2.03
RAD51B-222	ENST00000555907	PRM1	P04553	51 aa		2.27	□□□□□ -2.05
RAD51B-222	ENST00000555907	KRTAP21-2	Q3LI59	83 aa		2.24	□□□□□ -2.05
RAD51B-222	ENST00000555907	MUC19	Q7Z5P9	8384 aa		1.94	□□□□□ -2.1
RAD51B-222	ENST00000555907	KRTAP21-1	Q3LI58	79 aa		1.74	□□□□□ -2.13
RAD51B-222	ENST00000555907	MUC16	Q8WXI7	14507 aa		1.39	□□□□□ -2.19

Retrieved 78 of 20,778 RNA–protein pairs in 118.7 ms