RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 KRTAP2-2Q9BYT5 123 aa5.11□□□□□ -1.59
SNX6-203ENST00000555416 KRTAP2-1Q9BYU5 128 aa5.11□□□□□ -1.59
SNX6-203ENST00000555416 LINC01558Q9Y6Z2 57 aa5.11□□□□□ -1.59
SNX6-203ENST00000555416 MT1EP04732 61 aa5.09□□□□□ -1.59
SNX6-203ENST00000555416 TMEM258P61165 79 aa5.09□□□□□ -1.59
SNX6-203ENST00000555416 PRR15LQ9BU68 103 aa5.05□□□□□ -1.6
SNX6-203ENST00000555416 C10orf95Q9H7T3 257 aa5.05□□□□□ -1.6
SNX6-203ENST00000555416 KRTAP19-5Q3LI72 72 aa5.04□□□□□ -1.6
SNX6-203ENST00000555416 V9GYY9 64 aa5.04□□□□□ -1.6
SNX6-203ENST00000555416 A0A0A0MQY5 61 aa5.01□□□□□ -1.61
SNX6-203ENST00000555416 KRTAP19-3Q7Z4W3 81 aa5.01□□□□□ -1.61
SNX6-203ENST00000555416 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
SNX6-203ENST00000555416 UQCR11O14957 56 aa4.93□□□□□ -1.62
SNX6-203ENST00000555416 TNP1P09430 55 aa4.93□□□□□ -1.62
SNX6-203ENST00000555416 MT1GP13640 62 aa4.89□□□□□ -1.63
SNX6-203ENST00000555416 MT1LQ93083 61 aa4.89□□□□□ -1.63
SNX6-203ENST00000555416 DSTQ03001 7570 aaKnown RBP4.88□□□□□ -1.63
SNX6-203ENST00000555416 PSPHP1O15172 72 aa4.84□□□□□ -1.63
SNX6-203ENST00000555416 MIR22HGQ0VDD5 57 aa4.84□□□□□ -1.63
SNX6-203ENST00000555416 MT1MQ8N339 61 aa4.84□□□□□ -1.63
SNX6-203ENST00000555416 Q1T7F1 81 aa4.8□□□□□ -1.64
SNX6-203ENST00000555416 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
SNX6-203ENST00000555416 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
SNX6-203ENST00000555416 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
SNX6-203ENST00000555416 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
SNX6-203ENST00000555416 KRTAP25-1Q3LHN0 102 aa4.68□□□□□ -1.66
SNX6-203ENST00000555416 K7ERS5 55 aa4.65□□□□□ -1.67
SNX6-203ENST00000555416 A6NED7 52 aa4.62□□□□□ -1.67
SNX6-203ENST00000555416 MT4P47944 62 aa4.58□□□□□ -1.68
SNX6-203ENST00000555416 RPS28P62857 69 aaKnown RBP4.58□□□□□ -1.68
SNX6-203ENST00000555416 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
SNX6-203ENST00000555416 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
SNX6-203ENST00000555416 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
SNX6-203ENST00000555416 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.51□□□□□ -1.69
SNX6-203ENST00000555416 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
SNX6-203ENST00000555416 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
SNX6-203ENST00000555416 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
SNX6-203ENST00000555416 ROMO1P60602 79 aa4.43□□□□□ -1.7
SNX6-203ENST00000555416 LCE3CQ5T5A8 94 aa4.38□□□□□ -1.71
SNX6-203ENST00000555416 AHNAK2Q8IVF2 5795 aa4.33□□□□□ -1.72
SNX6-203ENST00000555416 KRTAP20-2Q3LI61 65 aa4.31□□□□□ -1.72
SNX6-203ENST00000555416 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
SNX6-203ENST00000555416 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
SNX6-203ENST00000555416 KRTAP5-10Q6L8G5 202 aa4.25□□□□□ -1.73
SNX6-203ENST00000555416 KRTAP12-4P60329 112 aa4.24□□□□□ -1.73
SNX6-203ENST00000555416 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
SNX6-203ENST00000555416 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
SNX6-203ENST00000555416 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
SNX6-203ENST00000555416 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
SNX6-203ENST00000555416 MT3P25713 68 aa4.16□□□□□ -1.74
SNX6-203ENST00000555416 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
SNX6-203ENST00000555416 MT1AP04731 61 aa4.14□□□□□ -1.75
SNX6-203ENST00000555416 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
SNX6-203ENST00000555416 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
SNX6-203ENST00000555416 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
SNX6-203ENST00000555416 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
SNX6-203ENST00000555416 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
SNX6-203ENST00000555416 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
SNX6-203ENST00000555416 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
SNX6-203ENST00000555416 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
SNX6-203ENST00000555416 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
SNX6-203ENST00000555416 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
SNX6-203ENST00000555416 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
SNX6-203ENST00000555416 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
SNX6-203ENST00000555416 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
SNX6-203ENST00000555416 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
SNX6-203ENST00000555416 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
SNX6-203ENST00000555416 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
SNX6-203ENST00000555416 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
SNX6-203ENST00000555416 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
SNX6-203ENST00000555416 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
SNX6-203ENST00000555416 INE1O15225 51 aa3.05□□□□□ -1.92
SNX6-203ENST00000555416 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
SNX6-203ENST00000555416 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
SNX6-203ENST00000555416 PRM1P04553 51 aa2.3□□□□□ -2.04
SNX6-203ENST00000555416 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
SNX6-203ENST00000555416 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
SNX6-203ENST00000555416 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 92.7 ms