RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 FAT1Q14517 4588 aa0.32□□□□□ -2.36
VRK1-205ENST00000555402 MT4P47944 62 aa0.32□□□□□ -2.36
VRK1-205ENST00000555402 DNAH2Q9P225 4427 aa0.32□□□□□ -2.36
VRK1-205ENST00000555402 LRP2P98164 4655 aa0.31□□□□□ -2.36
VRK1-205ENST00000555402 SPRR2EP22531 72 aa0.31□□□□□ -2.36
VRK1-205ENST00000555402 SPRR2AP35326 72 aa0.31□□□□□ -2.36
VRK1-205ENST00000555402 DEFB110Q30KQ9 67 aa0.31□□□□□ -2.36
VRK1-205ENST00000555402 KRTAP6-2Q3LI66 62 aa0.31□□□□□ -2.36
VRK1-205ENST00000555402 VPS13DQ5THJ4 4388 aa0.3□□□□□ -2.36
VRK1-205ENST00000555402 APOBP04114 4563 aaKnown RBP0.3□□□□□ -2.36
VRK1-205ENST00000555402 A8MTW9 85 aa0.3□□□□□ -2.36
VRK1-205ENST00000555402 KRTAP19-6Q3LI70 58 aa0.3□□□□□ -2.36
VRK1-205ENST00000555402 DNAH17Q9UFH2 4485 aa0.3□□□□□ -2.36
VRK1-205ENST00000555402 TNP1P09430 55 aa0.29□□□□□ -2.36
VRK1-205ENST00000555402 DNAH5Q8TE73 4624 aa0.29□□□□□ -2.36
VRK1-205ENST00000555402 MUC17Q685J3 4493 aa0.29□□□□□ -2.36
VRK1-205ENST00000555402 STARD9Q9P2P6 4700 aa0.29□□□□□ -2.36
VRK1-205ENST00000555402 DNAH11Q96DT5 4516 aa0.28□□□□□ -2.36
VRK1-205ENST00000555402 GCC2Q8IWJ2 1684 aa0.28□□□□□ -2.36
VRK1-205ENST00000555402 M0QZ58 72 aa0.27□□□□□ -2.37
VRK1-205ENST00000555402 STATHP02808 62 aa0.25□□□□□ -2.37
VRK1-205ENST00000555402 SPRR2FQ96RM1 72 aa0.25□□□□□ -2.37
VRK1-205ENST00000555402 FLGP20930 4061 aaPredicted RBP0.25□□□□□ -2.37
VRK1-205ENST00000555402 DNAH8Q96JB1 4490 aa0.24□□□□□ -2.37
VRK1-205ENST00000555402 POLR2KP53803 58 aaKnown RBP0.23□□□□□ -2.37
VRK1-205ENST00000555402 DEFB104AQ8WTQ1 72 aa0.22□□□□□ -2.37
VRK1-205ENST00000555402 MT1AP04731 61 aa0.2□□□□□ -2.38
VRK1-205ENST00000555402 MT1HP80294 61 aa0.19□□□□□ -2.38
VRK1-205ENST00000555402 SPRR2GQ9BYE4 73 aa0.19□□□□□ -2.38
VRK1-205ENST00000555402 MT1HL1P0DM35 61 aa0.18□□□□□ -2.38
VRK1-205ENST00000555402 CD52P31358 61 aa0.18□□□□□ -2.38
VRK1-205ENST00000555402 CLPSL2Q6UWE3 100 aa0.18□□□□□ -2.38
VRK1-205ENST00000555402 DEFB133Q30KQ1 61 aa0.17□□□□□ -2.38
VRK1-205ENST00000555402 H3BSH0 61 aa0.16□□□□□ -2.38
VRK1-205ENST00000555402 KRTAP8-1Q8IUC2 63 aa0.16□□□□□ -2.38
VRK1-205ENST00000555402 KRTAP20-2Q3LI61 65 aa0.15□□□□□ -2.39
VRK1-205ENST00000555402 MT1FP04733 61 aa0.13□□□□□ -2.39
VRK1-205ENST00000555402 DEFB4AO15263 64 aa0.12□□□□□ -2.39
VRK1-205ENST00000555402 MT2AP02795 61 aa0.12□□□□□ -2.39
VRK1-205ENST00000555402 DEFB108AA8MXU0 73 aa0.11□□□□□ -2.39
VRK1-205ENST00000555402 HTN3P15516 51 aa0.11□□□□□ -2.39
VRK1-205ENST00000555402 RPL39P62891 51 aaKnown RBP0.11□□□□□ -2.39
VRK1-205ENST00000555402 SPART-AS1P0CW21 52 aa0.1□□□□□ -2.39
VRK1-205ENST00000555402 SNRPGP62308 76 aaKnown RBP0.1□□□□□ -2.39
VRK1-205ENST00000555402 DEFB136Q30KP8 78 aa0.1□□□□□ -2.39
VRK1-205ENST00000555402 TTTY10Q9BZA0 68 aa0.1□□□□□ -2.39
VRK1-205ENST00000555402 Q9Y3F1 56 aa0.1□□□□□ -2.39
VRK1-205ENST00000555402 KRTAP19-2Q3LHN2 52 aa0.09□□□□□ -2.4
VRK1-205ENST00000555402 H3BUX3 64 aa0.06□□□□□ -2.4
VRK1-205ENST00000555402 TOMM7Q9P0U1 55 aa0.06□□□□□ -2.4
VRK1-205ENST00000555402 APELAP0DMC3 54 aa0.05□□□□□ -2.4
VRK1-205ENST00000555402 KRTAP19-5Q3LI72 72 aa0.05□□□□□ -2.4
VRK1-205ENST00000555402 DEFB108BQ8NET1 73 aa0.05□□□□□ -2.4
VRK1-205ENST00000555402 RPL39LQ96EH5 51 aaKnown RBP0.04□□□□□ -2.4
VRK1-205ENST00000555402 MT1BP07438 61 aa0.03□□□□□ -2.4
VRK1-205ENST00000555402 MT1GP13640 62 aa0.03□□□□□ -2.4
VRK1-205ENST00000555402 KRTAP19-8Q3LI54 63 aa0.03□□□□□ -2.4
VRK1-205ENST00000555402 A0A096LPF7 62 aa0.02□□□□□ -2.41
VRK1-205ENST00000555402 KRTAP19-7Q3SYF9 63 aa0.02□□□□□ -2.41
VRK1-205ENST00000555402 MT1MQ8N339 61 aa0.02□□□□□ -2.41
VRK1-205ENST00000555402 KRTAP6-1Q3LI64 71 aa0.01□□□□□ -2.41
VRK1-205ENST00000555402 DEFB1P60022 68 aa0□□□□□ -2.41
VRK1-205ENST00000555402 LINC01556Q5JQF7 62 aa0□□□□□ -2.41
VRK1-205ENST00000555402 MT1EP04732 61 aa-0.01□□□□□ -2.41
VRK1-205ENST00000555402 RPS29P62273 56 aaKnown RBP-0.01□□□□□ -2.41
VRK1-205ENST00000555402 LEAP2Q969E1 77 aa-0.02□□□□□ -2.41
VRK1-205ENST00000555402 HTN1P15515 57 aa-0.03□□□□□ -2.41
VRK1-205ENST00000555402 MT1XP80297 61 aa-0.03□□□□□ -2.41
VRK1-205ENST00000555402 COX14Q96I36 57 aa-0.04□□□□□ -2.42
VRK1-205ENST00000555402 MT1LQ93083 61 aa-0.05□□□□□ -2.42
VRK1-205ENST00000555402 A0A096LNI7 61 aa-0.06□□□□□ -2.42
VRK1-205ENST00000555402 LINC01590Q5TEZ4 76 aa-0.11□□□□□ -2.43
VRK1-205ENST00000555402 RHPN1-AS1Q9BWJ2 59 aa-0.12□□□□□ -2.43
VRK1-205ENST00000555402 TMEM167AQ8TBQ9 72 aa-0.13□□□□□ -2.43
VRK1-205ENST00000555402 PRCDQ00LT1 54 aa-0.16□□□□□ -2.44
VRK1-205ENST00000555402 ARHGAP5-AS1Q96IT6 56 aa-0.17□□□□□ -2.44
VRK1-205ENST00000555402 RPL39P5Q59GN2 51 aa-0.18□□□□□ -2.44
VRK1-205ENST00000555402 K7EIM0 57 aa-0.23□□□□□ -2.45
Retrieved 78 of 20,778 RNA–protein pairs in 83.1 ms