RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 LINC01558Q9Y6Z2 57 aa3.38□□□□□ -1.87
AC004828.1-201ENST00000555303 A6NED7 52 aa3.37□□□□□ -1.87
AC004828.1-201ENST00000555303 MT1EP04732 61 aa3.37□□□□□ -1.87
AC004828.1-201ENST00000555303 KRTAP19-3Q7Z4W3 81 aa3.36□□□□□ -1.87
AC004828.1-201ENST00000555303 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
AC004828.1-201ENST00000555303 A0A0D9SG42 100 aa3.33□□□□□ -1.88
AC004828.1-201ENST00000555303 A0A1B0GU33 70 aa3.31□□□□□ -1.88
AC004828.1-201ENST00000555303 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
AC004828.1-201ENST00000555303 SPATA8Q6RVD6 105 aa3.3□□□□□ -1.88
AC004828.1-201ENST00000555303 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
AC004828.1-201ENST00000555303 PP632Q6XCG6 107 aa3.29□□□□□ -1.88
AC004828.1-201ENST00000555303 MT1GP13640 62 aa3.28□□□□□ -1.88
AC004828.1-201ENST00000555303 KRTAP12-1P59990 96 aa3.28□□□□□ -1.88
AC004828.1-201ENST00000555303 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
AC004828.1-201ENST00000555303 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
AC004828.1-201ENST00000555303 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
AC004828.1-201ENST00000555303 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
AC004828.1-201ENST00000555303 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
AC004828.1-201ENST00000555303 A0A1B0GU69 56 aa3.22□□□□□ -1.89
AC004828.1-201ENST00000555303 MT1MQ8N339 61 aa3.21□□□□□ -1.9
AC004828.1-201ENST00000555303 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
AC004828.1-201ENST00000555303 MT1LQ93083 61 aa3.2□□□□□ -1.9
AC004828.1-201ENST00000555303 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
AC004828.1-201ENST00000555303 TNP1P09430 55 aa3.18□□□□□ -1.9
AC004828.1-201ENST00000555303 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
AC004828.1-201ENST00000555303 MIR22HGQ0VDD5 57 aa3.15□□□□□ -1.91
AC004828.1-201ENST00000555303 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.91
AC004828.1-201ENST00000555303 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
AC004828.1-201ENST00000555303 UQCR11O14957 56 aa3.13□□□□□ -1.91
AC004828.1-201ENST00000555303 MT4P47944 62 aa3.13□□□□□ -1.91
AC004828.1-201ENST00000555303 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
AC004828.1-201ENST00000555303 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
AC004828.1-201ENST00000555303 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
AC004828.1-201ENST00000555303 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
AC004828.1-201ENST00000555303 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
AC004828.1-201ENST00000555303 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
AC004828.1-201ENST00000555303 ROMO1P60602 79 aa3.02□□□□□ -1.93
AC004828.1-201ENST00000555303 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
AC004828.1-201ENST00000555303 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
AC004828.1-201ENST00000555303 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.94
AC004828.1-201ENST00000555303 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
AC004828.1-201ENST00000555303 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
AC004828.1-201ENST00000555303 KRTAP5-3Q6L8H2 238 aa2.93□□□□□ -1.94
AC004828.1-201ENST00000555303 K7ERS5 55 aa2.92□□□□□ -1.94
AC004828.1-201ENST00000555303 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
AC004828.1-201ENST00000555303 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
AC004828.1-201ENST00000555303 MT3P25713 68 aa2.86□□□□□ -1.95
AC004828.1-201ENST00000555303 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
AC004828.1-201ENST00000555303 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
AC004828.1-201ENST00000555303 MT1AP04731 61 aa2.73□□□□□ -1.97
AC004828.1-201ENST00000555303 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
AC004828.1-201ENST00000555303 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
AC004828.1-201ENST00000555303 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
AC004828.1-201ENST00000555303 LUZP6Q538Z0 58 aa2.62□□□□□ -1.99
AC004828.1-201ENST00000555303 KRTAP9-6A8MVA2 160 aa2.61□□□□□ -1.99
AC004828.1-201ENST00000555303 KRTAP6-2Q3LI66 62 aa2.59□□□□□ -1.99
AC004828.1-201ENST00000555303 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
AC004828.1-201ENST00000555303 MUC5ACP98088 5654 aa2.56□□□□□ -2
AC004828.1-201ENST00000555303 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
AC004828.1-201ENST00000555303 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
AC004828.1-201ENST00000555303 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
AC004828.1-201ENST00000555303 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
AC004828.1-201ENST00000555303 LCE1FQ5T754 118 aa2.34□□□□□ -2.03
AC004828.1-201ENST00000555303 INE1O15225 51 aa2.3□□□□□ -2.04
AC004828.1-201ENST00000555303 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
AC004828.1-201ENST00000555303 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
AC004828.1-201ENST00000555303 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
AC004828.1-201ENST00000555303 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
AC004828.1-201ENST00000555303 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
AC004828.1-201ENST00000555303 LCE3EQ5T5B0 92 aa1.99□□□□□ -2.09
AC004828.1-201ENST00000555303 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
AC004828.1-201ENST00000555303 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
AC004828.1-201ENST00000555303 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
AC004828.1-201ENST00000555303 PRM1P04553 51 aa1.54□□□□□ -2.16
AC004828.1-201ENST00000555303 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
AC004828.1-201ENST00000555303 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
AC004828.1-201ENST00000555303 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 68 ms