RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 KRTAP19-3Q7Z4W3 81 aa5.17□□□□□ -1.58
CHD8-208ENST00000555301 SPRR2DP22532 72 aa5.13□□□□□ -1.59
CHD8-208ENST00000555301 LCE5AQ5TCM9 118 aa5.12□□□□□ -1.59
CHD8-208ENST00000555301 MT1GP13640 62 aa5.1□□□□□ -1.59
CHD8-208ENST00000555301 PMAIP1Q13794 54 aa5.1□□□□□ -1.59
CHD8-208ENST00000555301 MT1LQ93083 61 aa5.1□□□□□ -1.59
CHD8-208ENST00000555301 KRTAP20-1Q3LI63 56 aa5.07□□□□□ -1.6
CHD8-208ENST00000555301 PRO0628Q9UI54 55 aa5.07□□□□□ -1.6
CHD8-208ENST00000555301 KRTAP2-3P0C7H8 128 aa5.04□□□□□ -1.6
CHD8-208ENST00000555301 KRTAP2-4Q9BYR9 128 aa5.04□□□□□ -1.6
CHD8-208ENST00000555301 MT1MQ8N339 61 aa4.99□□□□□ -1.61
CHD8-208ENST00000555301 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
CHD8-208ENST00000555301 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
CHD8-208ENST00000555301 LCE3BQ5TA77 95 aa4.96□□□□□ -1.62
CHD8-208ENST00000555301 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
CHD8-208ENST00000555301 KRTAP2-1Q9BYU5 128 aa4.91□□□□□ -1.62
CHD8-208ENST00000555301 DSTQ03001 7570 aaKnown RBP4.87□□□□□ -1.63
CHD8-208ENST00000555301 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
CHD8-208ENST00000555301 KRTAP4-3Q9BYR4 195 aa4.83□□□□□ -1.64
CHD8-208ENST00000555301 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
CHD8-208ENST00000555301 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
CHD8-208ENST00000555301 KTN1-AS1Q86SY8 53 aa4.75□□□□□ -1.65
CHD8-208ENST00000555301 SVIPQ8NHG7 77 aa4.59□□□□□ -1.67
CHD8-208ENST00000555301 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
CHD8-208ENST00000555301 LOC100996750A0A140TA64 210 aa4.57□□□□□ -1.68
CHD8-208ENST00000555301 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
CHD8-208ENST00000555301 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
CHD8-208ENST00000555301 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
CHD8-208ENST00000555301 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
CHD8-208ENST00000555301 MT4P47944 62 aa4.45□□□□□ -1.7
CHD8-208ENST00000555301 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
CHD8-208ENST00000555301 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
CHD8-208ENST00000555301 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
CHD8-208ENST00000555301 MT1AP04731 61 aa4.35□□□□□ -1.71
CHD8-208ENST00000555301 KRTAP4-6Q9BYQ5 205 aa4.35□□□□□ -1.71
CHD8-208ENST00000555301 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
CHD8-208ENST00000555301 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
CHD8-208ENST00000555301 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
CHD8-208ENST00000555301 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
CHD8-208ENST00000555301 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
CHD8-208ENST00000555301 KRTAP5-3Q6L8H2 238 aa4.12□□□□□ -1.75
CHD8-208ENST00000555301 LUZP6Q538Z0 58 aa4.05□□□□□ -1.76
CHD8-208ENST00000555301 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
CHD8-208ENST00000555301 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
CHD8-208ENST00000555301 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
CHD8-208ENST00000555301 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
CHD8-208ENST00000555301 MT3P25713 68 aa3.99□□□□□ -1.77
CHD8-208ENST00000555301 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
CHD8-208ENST00000555301 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
CHD8-208ENST00000555301 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
CHD8-208ENST00000555301 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
CHD8-208ENST00000555301 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
CHD8-208ENST00000555301 H3BS24 57 aa3.63□□□□□ -1.83
CHD8-208ENST00000555301 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
CHD8-208ENST00000555301 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
CHD8-208ENST00000555301 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
CHD8-208ENST00000555301 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
CHD8-208ENST00000555301 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
CHD8-208ENST00000555301 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
CHD8-208ENST00000555301 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
CHD8-208ENST00000555301 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
CHD8-208ENST00000555301 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
CHD8-208ENST00000555301 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
CHD8-208ENST00000555301 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
CHD8-208ENST00000555301 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
CHD8-208ENST00000555301 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
CHD8-208ENST00000555301 A0A0A0MQY5 61 aa3.11□□□□□ -1.91
CHD8-208ENST00000555301 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
CHD8-208ENST00000555301 INE1O15225 51 aa2.99□□□□□ -1.93
CHD8-208ENST00000555301 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
CHD8-208ENST00000555301 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
CHD8-208ENST00000555301 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
CHD8-208ENST00000555301 PRM1P04553 51 aa2.75□□□□□ -1.97
CHD8-208ENST00000555301 PHGR1C9JFL3 82 aa2.53□□□□□ -2
CHD8-208ENST00000555301 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
CHD8-208ENST00000555301 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
CHD8-208ENST00000555301 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
CHD8-208ENST00000555301 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 304.2 ms