RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 SERP1Q9Y6X1 66 aa4.42□□□□□ -1.7
XRCC3-212ENST00000555231 SEC61GP60059 68 aa4.4□□□□□ -1.71
XRCC3-212ENST00000555231 A0A1B0GU33 70 aa4.38□□□□□ -1.71
XRCC3-212ENST00000555231 COA5Q86WW8 74 aa4.37□□□□□ -1.71
XRCC3-212ENST00000555231 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
XRCC3-212ENST00000555231 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
XRCC3-212ENST00000555231 TNP1P09430 55 aa4.33□□□□□ -1.72
XRCC3-212ENST00000555231 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
XRCC3-212ENST00000555231 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
XRCC3-212ENST00000555231 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
XRCC3-212ENST00000555231 A8MU10 97 aa4.28□□□□□ -1.72
XRCC3-212ENST00000555231 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
XRCC3-212ENST00000555231 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
XRCC3-212ENST00000555231 SMIM26A0A096LP01 95 aa4.25□□□□□ -1.73
XRCC3-212ENST00000555231 SERP2Q8N6R1 65 aa4.21□□□□□ -1.74
XRCC3-212ENST00000555231 A0A1B0GU69 56 aa4.15□□□□□ -1.75
XRCC3-212ENST00000555231 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
XRCC3-212ENST00000555231 K7ERU9 68 aa4.11□□□□□ -1.75
XRCC3-212ENST00000555231 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
XRCC3-212ENST00000555231 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
XRCC3-212ENST00000555231 H7BZZ5 65 aa4.01□□□□□ -1.77
XRCC3-212ENST00000555231 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
XRCC3-212ENST00000555231 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
XRCC3-212ENST00000555231 COX7CP15954 63 aa3.98□□□□□ -1.77
XRCC3-212ENST00000555231 MUC5BQ9HC84 5762 aaPredicted RBP3.98□□□□□ -1.77
XRCC3-212ENST00000555231 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
XRCC3-212ENST00000555231 MT1AP04731 61 aa3.93□□□□□ -1.78
XRCC3-212ENST00000555231 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
XRCC3-212ENST00000555231 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
XRCC3-212ENST00000555231 PRR15LQ9BU68 103 aa3.89□□□□□ -1.79
XRCC3-212ENST00000555231 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
XRCC3-212ENST00000555231 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
XRCC3-212ENST00000555231 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
XRCC3-212ENST00000555231 KRTAP23-1A1A580 65 aa3.83□□□□□ -1.8
XRCC3-212ENST00000555231 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
XRCC3-212ENST00000555231 LINC01558Q9Y6Z2 57 aa3.79□□□□□ -1.8
XRCC3-212ENST00000555231 UQCR11O14957 56 aa3.76□□□□□ -1.81
XRCC3-212ENST00000555231 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
XRCC3-212ENST00000555231 PCP4P48539 62 aa3.68□□□□□ -1.82
XRCC3-212ENST00000555231 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
XRCC3-212ENST00000555231 MIR22HGQ0VDD5 57 aa3.66□□□□□ -1.82
XRCC3-212ENST00000555231 ANAPC13Q9BS18 74 aa3.64□□□□□ -1.83
XRCC3-212ENST00000555231 K7ERS5 55 aa3.63□□□□□ -1.83
XRCC3-212ENST00000555231 CCDC179H3BU77 68 aa3.62□□□□□ -1.83
XRCC3-212ENST00000555231 ATP5EP56381 51 aaPredicted RBP3.61□□□□□ -1.83
XRCC3-212ENST00000555231 MT3P25713 68 aa3.6□□□□□ -1.83
XRCC3-212ENST00000555231 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
XRCC3-212ENST00000555231 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
XRCC3-212ENST00000555231 PSPHP1O15172 72 aa3.41□□□□□ -1.86
XRCC3-212ENST00000555231 TMEM258P61165 79 aa3.4□□□□□ -1.87
XRCC3-212ENST00000555231 CDC42SE1Q9NRR8 79 aa3.4□□□□□ -1.87
XRCC3-212ENST00000555231 Q1T7F1 81 aa3.39□□□□□ -1.87
XRCC3-212ENST00000555231 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
XRCC3-212ENST00000555231 ROMO1P60602 79 aa3.34□□□□□ -1.87
XRCC3-212ENST00000555231 V9GYY9 64 aa3.28□□□□□ -1.88
XRCC3-212ENST00000555231 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
XRCC3-212ENST00000555231 A6NED7 52 aa3.25□□□□□ -1.89
XRCC3-212ENST00000555231 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
XRCC3-212ENST00000555231 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
XRCC3-212ENST00000555231 PRAC1Q96KF2 57 aa2.89□□□□□ -1.95
XRCC3-212ENST00000555231 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
XRCC3-212ENST00000555231 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
XRCC3-212ENST00000555231 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
XRCC3-212ENST00000555231 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
XRCC3-212ENST00000555231 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
XRCC3-212ENST00000555231 NDUFAF8A1L188 74 aa2.55□□□□□ -2
XRCC3-212ENST00000555231 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
XRCC3-212ENST00000555231 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
XRCC3-212ENST00000555231 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
XRCC3-212ENST00000555231 BRK1Q8WUW1 75 aa2.36□□□□□ -2.03
XRCC3-212ENST00000555231 PRO0628Q9UI54 55 aa2.36□□□□□ -2.03
XRCC3-212ENST00000555231 LUZP6Q538Z0 58 aa2.24□□□□□ -2.05
XRCC3-212ENST00000555231 PMAIP1Q13794 54 aa2.17□□□□□ -2.06
XRCC3-212ENST00000555231 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
XRCC3-212ENST00000555231 KTN1-AS1Q86SY8 53 aa1.9□□□□□ -2.11
XRCC3-212ENST00000555231 PRM1P04553 51 aa1.71□□□□□ -2.14
XRCC3-212ENST00000555231 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
XRCC3-212ENST00000555231 INE1O15225 51 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 162.7 ms