RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 KRTAP19-3Q7Z4W3 81 aa6.07□□□□□ -1.44
MEG3-224ENST00000554639 FSIP2Q5CZC0 6907 aa6.03□□□□□ -1.44
MEG3-224ENST00000554639 KRTAP9-2Q9BYQ4 174 aa5.99□□□□□ -1.45
MEG3-224ENST00000554639 MT1MQ8N339 61 aa5.97□□□□□ -1.45
MEG3-224ENST00000554639 KRTAP2-3P0C7H8 128 aa5.96□□□□□ -1.46
MEG3-224ENST00000554639 KRTAP2-4Q9BYR9 128 aa5.96□□□□□ -1.46
MEG3-224ENST00000554639 KRTAP2-1Q9BYU5 128 aa5.96□□□□□ -1.46
MEG3-224ENST00000554639 SPRR2FQ96RM1 72 aa5.92□□□□□ -1.46
MEG3-224ENST00000554639 LCE5AQ5TCM9 118 aa5.91□□□□□ -1.46
MEG3-224ENST00000554639 CRCT1Q9UGL9 99 aa5.88□□□□□ -1.47
MEG3-224ENST00000554639 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
MEG3-224ENST00000554639 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
MEG3-224ENST00000554639 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.49
MEG3-224ENST00000554639 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
MEG3-224ENST00000554639 MACF1Q9UPN3 7388 aaKnown RBP5.67□□□□□ -1.5
MEG3-224ENST00000554639 LCE1AQ5T7P2 110 aa5.63□□□□□ -1.51
MEG3-224ENST00000554639 SPRR2EP22531 72 aa5.52□□□□□ -1.53
MEG3-224ENST00000554639 SPRR2BP35325 72 aa5.52□□□□□ -1.53
MEG3-224ENST00000554639 SPRR2AP35326 72 aa5.52□□□□□ -1.53
MEG3-224ENST00000554639 KRTAP6-3Q3LI67 103 aa5.49□□□□□ -1.53
MEG3-224ENST00000554639 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
MEG3-224ENST00000554639 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.42□□□□□ -1.54
MEG3-224ENST00000554639 SYNE2Q8WXH0 6885 aaKnown RBP5.41□□□□□ -1.54
MEG3-224ENST00000554639 MT1AP04731 61 aa5.39□□□□□ -1.55
MEG3-224ENST00000554639 KRTAP5-5Q701N2 237 aaPredicted RBP5.37□□□□□ -1.55
MEG3-224ENST00000554639 MDN1Q9NU22 5596 aa5.32□□□□□ -1.56
MEG3-224ENST00000554639 SPRR2DP22532 72 aa5.31□□□□□ -1.56
MEG3-224ENST00000554639 KRTAP6-1Q3LI64 71 aa5.28□□□□□ -1.56
MEG3-224ENST00000554639 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
MEG3-224ENST00000554639 LCE3BQ5TA77 95 aa5.21□□□□□ -1.58
MEG3-224ENST00000554639 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.58
MEG3-224ENST00000554639 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.6
MEG3-224ENST00000554639 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
MEG3-224ENST00000554639 LCE3DQ9BYE3 92 aa4.96□□□□□ -1.62
MEG3-224ENST00000554639 KRTAP5-4Q6L8H1 288 aa4.94□□□□□ -1.62
MEG3-224ENST00000554639 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
MEG3-224ENST00000554639 NEBP20929 6669 aa4.9□□□□□ -1.62
MEG3-224ENST00000554639 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
MEG3-224ENST00000554639 MT3P25713 68 aa4.88□□□□□ -1.63
MEG3-224ENST00000554639 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
MEG3-224ENST00000554639 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
MEG3-224ENST00000554639 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
MEG3-224ENST00000554639 PRM1P04553 51 aa4.66□□□□□ -1.66
MEG3-224ENST00000554639 KRTAP2-2Q9BYT5 123 aa4.64□□□□□ -1.67
MEG3-224ENST00000554639 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
MEG3-224ENST00000554639 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
MEG3-224ENST00000554639 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
MEG3-224ENST00000554639 MT4P47944 62 aa4.55□□□□□ -1.68
MEG3-224ENST00000554639 KRTAP20-1Q3LI63 56 aa4.51□□□□□ -1.69
MEG3-224ENST00000554639 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
MEG3-224ENST00000554639 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
MEG3-224ENST00000554639 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
MEG3-224ENST00000554639 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
MEG3-224ENST00000554639 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
MEG3-224ENST00000554639 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.79
MEG3-224ENST00000554639 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
MEG3-224ENST00000554639 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
MEG3-224ENST00000554639 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
MEG3-224ENST00000554639 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
MEG3-224ENST00000554639 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
MEG3-224ENST00000554639 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
MEG3-224ENST00000554639 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
MEG3-224ENST00000554639 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
MEG3-224ENST00000554639 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
MEG3-224ENST00000554639 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
MEG3-224ENST00000554639 KRTAP9-9Q9BYP9 154 aa3.48□□□□□ -1.85
MEG3-224ENST00000554639 KRTAP21-2Q3LI59 83 aa3.47□□□□□ -1.85
MEG3-224ENST00000554639 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
MEG3-224ENST00000554639 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
MEG3-224ENST00000554639 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
MEG3-224ENST00000554639 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
MEG3-224ENST00000554639 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
MEG3-224ENST00000554639 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
MEG3-224ENST00000554639 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
MEG3-224ENST00000554639 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
MEG3-224ENST00000554639 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
MEG3-224ENST00000554639 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
MEG3-224ENST00000554639 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 87.3 ms