RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 SYNE1Q8NF91 8797 aaKnown RBP3.52□□□□□ -1.85
NUMB-212ENST00000554546 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
NUMB-212ENST00000554546 KRTAP9-2Q9BYQ4 174 aa3.5□□□□□ -1.85
NUMB-212ENST00000554546 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
NUMB-212ENST00000554546 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.85
NUMB-212ENST00000554546 MT1LQ93083 61 aa3.46□□□□□ -1.86
NUMB-212ENST00000554546 MT1GP13640 62 aa3.4□□□□□ -1.86
NUMB-212ENST00000554546 KRTAP19-4Q3LI73 84 aa3.38□□□□□ -1.87
NUMB-212ENST00000554546 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
NUMB-212ENST00000554546 KRTAP9-3Q9BYQ3 159 aa3.38□□□□□ -1.87
NUMB-212ENST00000554546 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
NUMB-212ENST00000554546 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
NUMB-212ENST00000554546 LCE3BQ5TA77 95 aa3.37□□□□□ -1.87
NUMB-212ENST00000554546 USH2AO75445 5202 aa3.36□□□□□ -1.87
NUMB-212ENST00000554546 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
NUMB-212ENST00000554546 MT1EP04732 61 aa3.33□□□□□ -1.88
NUMB-212ENST00000554546 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
NUMB-212ENST00000554546 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
NUMB-212ENST00000554546 FCGBPQ9Y6R7 5405 aaPredicted RBP3.26□□□□□ -1.89
NUMB-212ENST00000554546 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
NUMB-212ENST00000554546 LCE2BO14633 110 aa3.21□□□□□ -1.9
NUMB-212ENST00000554546 MT1AP04731 61 aa3.2□□□□□ -1.9
NUMB-212ENST00000554546 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
NUMB-212ENST00000554546 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
NUMB-212ENST00000554546 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
NUMB-212ENST00000554546 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
NUMB-212ENST00000554546 MT1MQ8N339 61 aa3.07□□□□□ -1.92
NUMB-212ENST00000554546 FSIP2Q5CZC0 6907 aa3.06□□□□□ -1.92
NUMB-212ENST00000554546 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.02□□□□□ -1.93
NUMB-212ENST00000554546 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
NUMB-212ENST00000554546 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
NUMB-212ENST00000554546 LCE5AQ5TCM9 118 aa2.97□□□□□ -1.93
NUMB-212ENST00000554546 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
NUMB-212ENST00000554546 SPRR2FQ96RM1 72 aa2.94□□□□□ -1.94
NUMB-212ENST00000554546 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
NUMB-212ENST00000554546 MACF1Q9UPN3 7388 aaKnown RBP2.87□□□□□ -1.95
NUMB-212ENST00000554546 SYNE2Q8WXH0 6885 aaKnown RBP2.81□□□□□ -1.96
NUMB-212ENST00000554546 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
NUMB-212ENST00000554546 KRTAP4-6Q9BYQ5 205 aa2.78□□□□□ -1.96
NUMB-212ENST00000554546 NEBP20929 6669 aa2.76□□□□□ -1.97
NUMB-212ENST00000554546 SPRR2AP35326 72 aa2.71□□□□□ -1.98
NUMB-212ENST00000554546 SPRR2EP22531 72 aa2.68□□□□□ -1.98
NUMB-212ENST00000554546 SPRR2DP22532 72 aa2.67□□□□□ -1.98
NUMB-212ENST00000554546 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
NUMB-212ENST00000554546 KRTAP20-1Q3LI63 56 aa2.64□□□□□ -1.99
NUMB-212ENST00000554546 SPRR2BP35325 72 aa2.62□□□□□ -1.99
NUMB-212ENST00000554546 KRTAP9-4Q9BYQ2 154 aa2.61□□□□□ -1.99
NUMB-212ENST00000554546 MDN1Q9NU22 5596 aa2.59□□□□□ -1.99
NUMB-212ENST00000554546 MT3P25713 68 aa2.53□□□□□ -2
NUMB-212ENST00000554546 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
NUMB-212ENST00000554546 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
NUMB-212ENST00000554546 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
NUMB-212ENST00000554546 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
NUMB-212ENST00000554546 KRTAP9-9Q9BYP9 154 aa2.33□□□□□ -2.04
NUMB-212ENST00000554546 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
NUMB-212ENST00000554546 LCE4AQ5TA78 99 aa2.28□□□□□ -2.04
NUMB-212ENST00000554546 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.05
NUMB-212ENST00000554546 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
NUMB-212ENST00000554546 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
NUMB-212ENST00000554546 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
NUMB-212ENST00000554546 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
NUMB-212ENST00000554546 MT4P47944 62 aa2.18□□□□□ -2.06
NUMB-212ENST00000554546 KRTAP5-3Q6L8H2 238 aa2.14□□□□□ -2.07
NUMB-212ENST00000554546 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
NUMB-212ENST00000554546 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
NUMB-212ENST00000554546 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
NUMB-212ENST00000554546 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
NUMB-212ENST00000554546 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
NUMB-212ENST00000554546 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
NUMB-212ENST00000554546 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
NUMB-212ENST00000554546 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
NUMB-212ENST00000554546 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
NUMB-212ENST00000554546 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
NUMB-212ENST00000554546 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.66□□□□□ -2.14
NUMB-212ENST00000554546 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
NUMB-212ENST00000554546 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
NUMB-212ENST00000554546 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 10.2 ms