RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 Q5VV11 94 aa2.72□□□□□ -1.97
SCFD1-212ENST00000554486 PSPHP1O15172 72 aa2.71□□□□□ -1.98
SCFD1-212ENST00000554486 LINC01554Q52M75 96 aa2.71□□□□□ -1.98
SCFD1-212ENST00000554486 SPATA8Q6RVD6 105 aa2.71□□□□□ -1.98
SCFD1-212ENST00000554486 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
SCFD1-212ENST00000554486 A0A0D9SG42 100 aa2.67□□□□□ -1.98
SCFD1-212ENST00000554486 A6NN06 94 aa2.67□□□□□ -1.98
SCFD1-212ENST00000554486 PP632Q6XCG6 107 aa2.67□□□□□ -1.98
SCFD1-212ENST00000554486 CRCT1Q9UGL9 99 aa2.67□□□□□ -1.98
SCFD1-212ENST00000554486 FCGBPQ9Y6R7 5405 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-212ENST00000554486 UQCR11O14957 56 aa2.66□□□□□ -1.98
SCFD1-212ENST00000554486 KRTAP19-6Q3LI70 58 aa2.66□□□□□ -1.98
SCFD1-212ENST00000554486 PLAC4Q8WY50 150 aa2.65□□□□□ -1.99
SCFD1-212ENST00000554486 KRTAP12-1P59990 96 aa2.64□□□□□ -1.99
SCFD1-212ENST00000554486 MIR22HGQ0VDD5 57 aa2.63□□□□□ -1.99
SCFD1-212ENST00000554486 MT1XP80297 61 aa2.62□□□□□ -1.99
SCFD1-212ENST00000554486 A6NED7 52 aa2.61□□□□□ -1.99
SCFD1-212ENST00000554486 SPINT4Q6UDR6 99 aa2.61□□□□□ -1.99
SCFD1-212ENST00000554486 CDC42SE1Q9NRR8 79 aa2.56□□□□□ -2
SCFD1-212ENST00000554486 PRO2289Q9P1D8 64 aa2.56□□□□□ -2
SCFD1-212ENST00000554486 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
SCFD1-212ENST00000554486 K7ERS5 55 aa2.51□□□□□ -2.01
SCFD1-212ENST00000554486 C10orf95Q9H7T3 257 aa2.51□□□□□ -2.01
SCFD1-212ENST00000554486 SYNE2Q8WXH0 6885 aaKnown RBP2.5□□□□□ -2.01
SCFD1-212ENST00000554486 BRK1Q8WUW1 75 aa2.48□□□□□ -2.01
SCFD1-212ENST00000554486 KMT2DO14686 5537 aa2.47□□□□□ -2.01
SCFD1-212ENST00000554486 TNP1P09430 55 aa2.43□□□□□ -2.02
SCFD1-212ENST00000554486 ROMO1P60602 79 aa2.41□□□□□ -2.02
SCFD1-212ENST00000554486 KRTAP25-1Q3LHN0 102 aa2.4□□□□□ -2.03
SCFD1-212ENST00000554486 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
SCFD1-212ENST00000554486 KRTAP8-1Q8IUC2 63 aa2.38□□□□□ -2.03
SCFD1-212ENST00000554486 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
SCFD1-212ENST00000554486 PRO0628Q9UI54 55 aa2.36□□□□□ -2.03
SCFD1-212ENST00000554486 MUC12Q9UKN1 5478 aa2.35□□□□□ -2.03
SCFD1-212ENST00000554486 NEBP20929 6669 aa2.35□□□□□ -2.03
SCFD1-212ENST00000554486 PMAIP1Q13794 54 aa2.34□□□□□ -2.03
SCFD1-212ENST00000554486 KRTAP19-7Q3SYF9 63 aa2.34□□□□□ -2.03
SCFD1-212ENST00000554486 KRTAP19-5Q3LI72 72 aa2.33□□□□□ -2.04
SCFD1-212ENST00000554486 SPRR2FQ96RM1 72 aa2.33□□□□□ -2.04
SCFD1-212ENST00000554486 MT1EP04732 61 aa2.3□□□□□ -2.04
SCFD1-212ENST00000554486 KRTAP12-3P60328 96 aa2.28□□□□□ -2.04
SCFD1-212ENST00000554486 SPRR2EP22531 72 aa2.25□□□□□ -2.05
SCFD1-212ENST00000554486 SPRR2BP35325 72 aa2.25□□□□□ -2.05
SCFD1-212ENST00000554486 SPRR2AP35326 72 aa2.25□□□□□ -2.05
SCFD1-212ENST00000554486 LUZP6Q538Z0 58 aa2.24□□□□□ -2.05
SCFD1-212ENST00000554486 KRTAP19-3Q7Z4W3 81 aa2.23□□□□□ -2.05
SCFD1-212ENST00000554486 MT1LQ93083 61 aa2.23□□□□□ -2.05
SCFD1-212ENST00000554486 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
SCFD1-212ENST00000554486 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
SCFD1-212ENST00000554486 KTN1-AS1Q86SY8 53 aa2.2□□□□□ -2.06
SCFD1-212ENST00000554486 MT1GP13640 62 aa2.19□□□□□ -2.06
SCFD1-212ENST00000554486 SPRR2DP22532 72 aa2.17□□□□□ -2.06
SCFD1-212ENST00000554486 MT1MQ8N339 61 aa2.17□□□□□ -2.06
SCFD1-212ENST00000554486 DSTQ03001 7570 aaKnown RBP2.16□□□□□ -2.06
SCFD1-212ENST00000554486 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
SCFD1-212ENST00000554486 KRTAP2-3P0C7H8 128 aa2.1□□□□□ -2.07
SCFD1-212ENST00000554486 KRTAP20-1Q3LI63 56 aa2.1□□□□□ -2.07
SCFD1-212ENST00000554486 KRTAP2-4Q9BYR9 128 aa2.1□□□□□ -2.07
SCFD1-212ENST00000554486 KRTAP2-1Q9BYU5 128 aa2.04□□□□□ -2.08
SCFD1-212ENST00000554486 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
SCFD1-212ENST00000554486 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
SCFD1-212ENST00000554486 SYNE1Q8NF91 8797 aaKnown RBP1.92□□□□□ -2.1
SCFD1-212ENST00000554486 MT1AP04731 61 aa1.9□□□□□ -2.11
SCFD1-212ENST00000554486 KRTAP6-1Q3LI64 71 aa1.89□□□□□ -2.11
SCFD1-212ENST00000554486 MT4P47944 62 aa1.88□□□□□ -2.11
SCFD1-212ENST00000554486 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
SCFD1-212ENST00000554486 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
SCFD1-212ENST00000554486 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
SCFD1-212ENST00000554486 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
SCFD1-212ENST00000554486 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
SCFD1-212ENST00000554486 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
SCFD1-212ENST00000554486 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-212ENST00000554486 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
SCFD1-212ENST00000554486 INE1O15225 51 aa1.37□□□□□ -2.19
SCFD1-212ENST00000554486 PRM1P04553 51 aa1.25□□□□□ -2.21
SCFD1-212ENST00000554486 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
SCFD1-212ENST00000554486 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
SCFD1-212ENST00000554486 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 7.1 ms