RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 KRTAP19-2Q3LHN2 52 aa1.27□□□□□ -2.21
LRFN5-204ENST00000554171 LCE3EQ5T5B0 92 aa1.27□□□□□ -2.21
LRFN5-204ENST00000554171 KRTAP19-5Q3LI72 72 aa1.26□□□□□ -2.21
LRFN5-204ENST00000554171 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
LRFN5-204ENST00000554171 SMR3BP02814 79 aaPredicted RBP1.24□□□□□ -2.21
LRFN5-204ENST00000554171 DEFB4AO15263 64 aa1.21□□□□□ -2.22
LRFN5-204ENST00000554171 LCE3AQ5TA76 89 aa1.21□□□□□ -2.22
LRFN5-204ENST00000554171 MT1HL1P0DM35 61 aa1.21□□□□□ -2.22
LRFN5-204ENST00000554171 SPART-AS1P0CW21 52 aa1.2□□□□□ -2.22
LRFN5-204ENST00000554171 LCE3DQ9BYE3 92 aa1.19□□□□□ -2.22
LRFN5-204ENST00000554171 DMBT1Q9UGM3 2413 aaPredicted RBP1.19□□□□□ -2.22
LRFN5-204ENST00000554171 FCGBPQ9Y6R7 5405 aaPredicted RBP1.19□□□□□ -2.22
LRFN5-204ENST00000554171 KRTAP12-3P60328 96 aa1.18□□□□□ -2.22
LRFN5-204ENST00000554171 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.18□□□□□ -2.22
LRFN5-204ENST00000554171 TNP1P09430 55 aa1.16□□□□□ -2.22
LRFN5-204ENST00000554171 DEFB135Q30KP9 77 aa1.16□□□□□ -2.22
LRFN5-204ENST00000554171 MACF1Q9UPN3 7388 aaKnown RBP1.14□□□□□ -2.23
LRFN5-204ENST00000554171 C9orf92A6NGG3 77 aa1.13□□□□□ -2.23
LRFN5-204ENST00000554171 MUC12Q9UKN1 5478 aa1.13□□□□□ -2.23
LRFN5-204ENST00000554171 MT3P25713 68 aa1.12□□□□□ -2.23
LRFN5-204ENST00000554171 PRM1P04553 51 aa1.12□□□□□ -2.23
LRFN5-204ENST00000554171 CRCT1Q9UGL9 99 aa1.11□□□□□ -2.23
LRFN5-204ENST00000554171 KRTAP5-2Q701N4 177 aa1.11□□□□□ -2.23
LRFN5-204ENST00000554171 NEBP20929 6669 aa1.09□□□□□ -2.23
LRFN5-204ENST00000554171 SYNE2Q8WXH0 6885 aaKnown RBP1.09□□□□□ -2.24
LRFN5-204ENST00000554171 KRTAP4-1Q9BYQ7 146 aa1.08□□□□□ -2.24
LRFN5-204ENST00000554171 KRTAP5-9P26371 169 aa1.08□□□□□ -2.24
LRFN5-204ENST00000554171 FSIP2Q5CZC0 6907 aa1.08□□□□□ -2.24
LRFN5-204ENST00000554171 OBSCNQ5VST9 7968 aa1.07□□□□□ -2.24
LRFN5-204ENST00000554171 MT1AP04731 61 aa1.07□□□□□ -2.24
LRFN5-204ENST00000554171 KMT2DO14686 5537 aa1.07□□□□□ -2.24
LRFN5-204ENST00000554171 MDN1Q9NU22 5596 aa1.06□□□□□ -2.24
LRFN5-204ENST00000554171 HTN3P15516 51 aa1.05□□□□□ -2.24
LRFN5-204ENST00000554171 KRTAP5-1Q6L8H4 278 aa1.05□□□□□ -2.24
LRFN5-204ENST00000554171 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
LRFN5-204ENST00000554171 KRTAP20-1Q3LI63 56 aa1.03□□□□□ -2.24
LRFN5-204ENST00000554171 LCE1CQ5T751 118 aa1.03□□□□□ -2.24
LRFN5-204ENST00000554171 LCE1BQ5T7P3 118 aa1.03□□□□□ -2.24
LRFN5-204ENST00000554171 MT1HP80294 61 aa1.01□□□□□ -2.25
LRFN5-204ENST00000554171 SPRR2GQ9BYE4 73 aa1.01□□□□□ -2.25
LRFN5-204ENST00000554171 KRTAP19-6Q3LI70 58 aa1□□□□□ -2.25
LRFN5-204ENST00000554171 M0R2T5 61 aa0.99□□□□□ -2.25
LRFN5-204ENST00000554171 KRTAP4-4Q9BYR3 166 aa0.99□□□□□ -2.25
LRFN5-204ENST00000554171 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
LRFN5-204ENST00000554171 KRTAP6-2Q3LI66 62 aa0.98□□□□□ -2.25
LRFN5-204ENST00000554171 MT1XP80297 61 aa0.98□□□□□ -2.25
LRFN5-204ENST00000554171 MT1EP04732 61 aa0.95□□□□□ -2.26
LRFN5-204ENST00000554171 KRTAP19-3Q7Z4W3 81 aa0.93□□□□□ -2.26
LRFN5-204ENST00000554171 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
LRFN5-204ENST00000554171 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
LRFN5-204ENST00000554171 KRTAP5-4Q6L8H1 288 aa0.92□□□□□ -2.26
LRFN5-204ENST00000554171 KRTAP19-7Q3SYF9 63 aa0.91□□□□□ -2.26
LRFN5-204ENST00000554171 DSTQ03001 7570 aaKnown RBP0.9□□□□□ -2.27
LRFN5-204ENST00000554171 KRTAP19-8Q3LI54 63 aa0.9□□□□□ -2.27
LRFN5-204ENST00000554171 KRTAP5-7Q6L8G8 165 aa0.9□□□□□ -2.27
LRFN5-204ENST00000554171 MT1FP04733 61 aa0.89□□□□□ -2.27
LRFN5-204ENST00000554171 SYNE1Q8NF91 8797 aaKnown RBP0.89□□□□□ -2.27
LRFN5-204ENST00000554171 KRTAP5-8O75690 187 aa0.88□□□□□ -2.27
LRFN5-204ENST00000554171 MT2AP02795 61 aa0.88□□□□□ -2.27
LRFN5-204ENST00000554171 KRTAP4-3Q9BYR4 195 aa0.88□□□□□ -2.27
LRFN5-204ENST00000554171 SPRR2FQ96RM1 72 aa0.87□□□□□ -2.27
LRFN5-204ENST00000554171 MT1BP07438 61 aa0.86□□□□□ -2.27
LRFN5-204ENST00000554171 MT1LQ93083 61 aa0.85□□□□□ -2.27
LRFN5-204ENST00000554171 SPRR2DP22532 72 aa0.84□□□□□ -2.27
LRFN5-204ENST00000554171 SPRR2AP35326 72 aa0.81□□□□□ -2.28
LRFN5-204ENST00000554171 SPRR2BP35325 72 aa0.81□□□□□ -2.28
LRFN5-204ENST00000554171 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
LRFN5-204ENST00000554171 SPRR2EP22531 72 aa0.78□□□□□ -2.28
LRFN5-204ENST00000554171 MUC19Q7Z5P9 8384 aa0.75□□□□□ -2.29
LRFN5-204ENST00000554171 KRTAP6-1Q3LI64 71 aa0.72□□□□□ -2.29
LRFN5-204ENST00000554171 MT1GP13640 62 aa0.69□□□□□ -2.3
LRFN5-204ENST00000554171 KRTAP20-2Q3LI61 65 aa0.66□□□□□ -2.3
LRFN5-204ENST00000554171 MT1MQ8N339 61 aa0.64□□□□□ -2.31
LRFN5-204ENST00000554171 KRTAP21-2Q3LI59 83 aa0.6□□□□□ -2.31
LRFN5-204ENST00000554171 MT4P47944 62 aa0.52□□□□□ -2.33
LRFN5-204ENST00000554171 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
LRFN5-204ENST00000554171 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 25.1 ms