RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 K7ERS5 55 aa3.01□□□□□ -1.93
ABCD4-220ENST00000553998 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
ABCD4-220ENST00000553998 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
ABCD4-220ENST00000553998 LCE1DQ5T752 114 aa2.98□□□□□ -1.93
ABCD4-220ENST00000553998 LCE5AQ5TCM9 118 aa2.98□□□□□ -1.93
ABCD4-220ENST00000553998 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
ABCD4-220ENST00000553998 C10orf95Q9H7T3 257 aa2.95□□□□□ -1.94
ABCD4-220ENST00000553998 CDC42SE1Q9NRR8 79 aa2.95□□□□□ -1.94
ABCD4-220ENST00000553998 TNP1P09430 55 aa2.94□□□□□ -1.94
ABCD4-220ENST00000553998 KRTAP9-9Q9BYP9 154 aa2.92□□□□□ -1.94
ABCD4-220ENST00000553998 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
ABCD4-220ENST00000553998 LCE4AQ5TA78 99 aa2.91□□□□□ -1.94
ABCD4-220ENST00000553998 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.95
ABCD4-220ENST00000553998 KRTAP19-7Q3SYF9 63 aa2.89□□□□□ -1.95
ABCD4-220ENST00000553998 KRTAP25-1Q3LHN0 102 aa2.88□□□□□ -1.95
ABCD4-220ENST00000553998 MT1EP04732 61 aa2.87□□□□□ -1.95
ABCD4-220ENST00000553998 MT4P47944 62 aa2.87□□□□□ -1.95
ABCD4-220ENST00000553998 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
ABCD4-220ENST00000553998 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
ABCD4-220ENST00000553998 LCE3AQ5TA76 89 aa2.83□□□□□ -1.96
ABCD4-220ENST00000553998 MT1GP13640 62 aa2.82□□□□□ -1.96
ABCD4-220ENST00000553998 ROMO1P60602 79 aa2.82□□□□□ -1.96
ABCD4-220ENST00000553998 KRTAP23-1A1A580 65 aa2.8□□□□□ -1.96
ABCD4-220ENST00000553998 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
ABCD4-220ENST00000553998 BRK1Q8WUW1 75 aa2.8□□□□□ -1.96
ABCD4-220ENST00000553998 KRTAP5-3Q6L8H2 238 aa2.79□□□□□ -1.96
ABCD4-220ENST00000553998 PP632Q6XCG6 107 aa2.76□□□□□ -1.97
ABCD4-220ENST00000553998 MT1MQ8N339 61 aa2.75□□□□□ -1.97
ABCD4-220ENST00000553998 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
ABCD4-220ENST00000553998 MT1LQ93083 61 aa2.71□□□□□ -1.98
ABCD4-220ENST00000553998 KRTAP4-7Q9BYR0 210 aa2.7□□□□□ -1.98
ABCD4-220ENST00000553998 SPRR5A0A1B0GTR4 108 aa2.68□□□□□ -1.98
ABCD4-220ENST00000553998 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
ABCD4-220ENST00000553998 KRTAP4-3Q9BYR4 195 aa2.67□□□□□ -1.98
ABCD4-220ENST00000553998 H3BS24 57 aa2.66□□□□□ -1.98
ABCD4-220ENST00000553998 KRTAP19-4Q3LI73 84 aa2.66□□□□□ -1.98
ABCD4-220ENST00000553998 PMAIP1Q13794 54 aa2.65□□□□□ -1.99
ABCD4-220ENST00000553998 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
ABCD4-220ENST00000553998 PRO0628Q9UI54 55 aa2.64□□□□□ -1.99
ABCD4-220ENST00000553998 KRTAP15-1Q3LI76 137 aa2.63□□□□□ -1.99
ABCD4-220ENST00000553998 A0A0A0MQY5 61 aa2.61□□□□□ -1.99
ABCD4-220ENST00000553998 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
ABCD4-220ENST00000553998 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
ABCD4-220ENST00000553998 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
ABCD4-220ENST00000553998 SYNE1Q8NF91 8797 aaKnown RBP2.57□□□□□ -2
ABCD4-220ENST00000553998 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
ABCD4-220ENST00000553998 KRTAP12-4P60329 112 aa2.55□□□□□ -2
ABCD4-220ENST00000553998 LCE3CQ5T5A8 94 aa2.54□□□□□ -2
ABCD4-220ENST00000553998 MUC5ACP98088 5654 aa2.53□□□□□ -2
ABCD4-220ENST00000553998 PRAC1Q96KF2 57 aa2.48□□□□□ -2.01
ABCD4-220ENST00000553998 KTN1-AS1Q86SY8 53 aa2.47□□□□□ -2.01
ABCD4-220ENST00000553998 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
ABCD4-220ENST00000553998 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
ABCD4-220ENST00000553998 KRTAP9-6A8MVA2 160 aa2.36□□□□□ -2.03
ABCD4-220ENST00000553998 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
ABCD4-220ENST00000553998 MT1AP04731 61 aa2.32□□□□□ -2.04
ABCD4-220ENST00000553998 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
ABCD4-220ENST00000553998 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
ABCD4-220ENST00000553998 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
ABCD4-220ENST00000553998 MT3P25713 68 aa2.12□□□□□ -2.07
ABCD4-220ENST00000553998 LUZP6Q538Z0 58 aa2.11□□□□□ -2.07
ABCD4-220ENST00000553998 LCE1EQ5T753 118 aa2.05□□□□□ -2.08
ABCD4-220ENST00000553998 NDUFAF8A1L188 74 aa1.96□□□□□ -2.1
ABCD4-220ENST00000553998 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
ABCD4-220ENST00000553998 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
ABCD4-220ENST00000553998 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
ABCD4-220ENST00000553998 LCE3EQ5T5B0 92 aa1.8□□□□□ -2.12
ABCD4-220ENST00000553998 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
ABCD4-220ENST00000553998 LCE1FQ5T754 118 aa1.77□□□□□ -2.13
ABCD4-220ENST00000553998 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
ABCD4-220ENST00000553998 INE1O15225 51 aa1.72□□□□□ -2.13
ABCD4-220ENST00000553998 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
ABCD4-220ENST00000553998 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
ABCD4-220ENST00000553998 KRTAP4-4Q9BYR3 166 aa1.49□□□□□ -2.17
ABCD4-220ENST00000553998 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.17
ABCD4-220ENST00000553998 PRM1P04553 51 aa1.43□□□□□ -2.18
ABCD4-220ENST00000553998 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
ABCD4-220ENST00000553998 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms