RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
AL049839.2-201ENST00000553947 KMT2DO14686 5537 aa3.41□□□□□ -1.86
AL049839.2-201ENST00000553947 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.87
AL049839.2-201ENST00000553947 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
AL049839.2-201ENST00000553947 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.87
AL049839.2-201ENST00000553947 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
AL049839.2-201ENST00000553947 SSPOA2VEC9 5147 aa3.31□□□□□ -1.88
AL049839.2-201ENST00000553947 FSIP2Q5CZC0 6907 aa3.26□□□□□ -1.89
AL049839.2-201ENST00000553947 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
AL049839.2-201ENST00000553947 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
AL049839.2-201ENST00000553947 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
AL049839.2-201ENST00000553947 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
AL049839.2-201ENST00000553947 MT1EP04732 61 aa3.14□□□□□ -1.91
AL049839.2-201ENST00000553947 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
AL049839.2-201ENST00000553947 MT1LQ93083 61 aa3.12□□□□□ -1.91
AL049839.2-201ENST00000553947 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
AL049839.2-201ENST00000553947 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
AL049839.2-201ENST00000553947 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
AL049839.2-201ENST00000553947 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
AL049839.2-201ENST00000553947 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
AL049839.2-201ENST00000553947 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
AL049839.2-201ENST00000553947 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
AL049839.2-201ENST00000553947 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
AL049839.2-201ENST00000553947 MT1MQ8N339 61 aa2.94□□□□□ -1.94
AL049839.2-201ENST00000553947 MACF1Q9UPN3 7388 aaKnown RBP2.94□□□□□ -1.94
AL049839.2-201ENST00000553947 MT1GP13640 62 aa2.92□□□□□ -1.94
AL049839.2-201ENST00000553947 SPRR2FQ96RM1 72 aa2.91□□□□□ -1.94
AL049839.2-201ENST00000553947 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
AL049839.2-201ENST00000553947 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
AL049839.2-201ENST00000553947 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
AL049839.2-201ENST00000553947 LCE1AQ5T7P2 110 aa2.83□□□□□ -1.96
AL049839.2-201ENST00000553947 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
AL049839.2-201ENST00000553947 KRTAP6-3Q3LI67 103 aa2.76□□□□□ -1.97
AL049839.2-201ENST00000553947 KRTAP5-9P26371 169 aa2.74□□□□□ -1.97
AL049839.2-201ENST00000553947 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
AL049839.2-201ENST00000553947 NEBP20929 6669 aa2.72□□□□□ -1.97
AL049839.2-201ENST00000553947 PRM1P04553 51 aa2.7□□□□□ -1.98
AL049839.2-201ENST00000553947 KRTAP20-1Q3LI63 56 aa2.68□□□□□ -1.98
AL049839.2-201ENST00000553947 SPRR2EP22531 72 aa2.67□□□□□ -1.98
AL049839.2-201ENST00000553947 SPRR2BP35325 72 aa2.67□□□□□ -1.98
AL049839.2-201ENST00000553947 SPRR2AP35326 72 aa2.67□□□□□ -1.98
AL049839.2-201ENST00000553947 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
AL049839.2-201ENST00000553947 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
AL049839.2-201ENST00000553947 KRTAP2-2Q9BYT5 123 aa2.62□□□□□ -1.99
AL049839.2-201ENST00000553947 MT1AP04731 61 aa2.61□□□□□ -1.99
AL049839.2-201ENST00000553947 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
AL049839.2-201ENST00000553947 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
AL049839.2-201ENST00000553947 OBSCNQ5VST9 7968 aa2.59□□□□□ -2
AL049839.2-201ENST00000553947 MT3P25713 68 aa2.58□□□□□ -2
AL049839.2-201ENST00000553947 SPRR2DP22532 72 aa2.56□□□□□ -2
AL049839.2-201ENST00000553947 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
AL049839.2-201ENST00000553947 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
AL049839.2-201ENST00000553947 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
AL049839.2-201ENST00000553947 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
AL049839.2-201ENST00000553947 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
AL049839.2-201ENST00000553947 MT4P47944 62 aa2.27□□□□□ -2.05
AL049839.2-201ENST00000553947 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
AL049839.2-201ENST00000553947 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.05
AL049839.2-201ENST00000553947 HMCN1Q96RW7 5635 aa2.19□□□□□ -2.06
AL049839.2-201ENST00000553947 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
AL049839.2-201ENST00000553947 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
AL049839.2-201ENST00000553947 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
AL049839.2-201ENST00000553947 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
AL049839.2-201ENST00000553947 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
AL049839.2-201ENST00000553947 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
AL049839.2-201ENST00000553947 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
AL049839.2-201ENST00000553947 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
AL049839.2-201ENST00000553947 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
AL049839.2-201ENST00000553947 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
AL049839.2-201ENST00000553947 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
AL049839.2-201ENST00000553947 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
AL049839.2-201ENST00000553947 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
AL049839.2-201ENST00000553947 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
AL049839.2-201ENST00000553947 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
AL049839.2-201ENST00000553947 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
AL049839.2-201ENST00000553947 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
AL049839.2-201ENST00000553947 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 117.3 ms