RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 PSPHP1O15172 72 aa3.55□□□□□ -1.84
CHD8-206ENST00000553870 MDN1Q9NU22 5596 aa3.55□□□□□ -1.84
CHD8-206ENST00000553870 TNP1P09430 55 aa3.54□□□□□ -1.84
CHD8-206ENST00000553870 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
CHD8-206ENST00000553870 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
CHD8-206ENST00000553870 K7ERS5 55 aa3.52□□□□□ -1.85
CHD8-206ENST00000553870 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
CHD8-206ENST00000553870 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
CHD8-206ENST00000553870 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
CHD8-206ENST00000553870 SPRR2DP22532 72 aa3.47□□□□□ -1.85
CHD8-206ENST00000553870 A6NED7 52 aa3.46□□□□□ -1.86
CHD8-206ENST00000553870 MT1EP04732 61 aa3.46□□□□□ -1.86
CHD8-206ENST00000553870 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
CHD8-206ENST00000553870 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
CHD8-206ENST00000553870 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
CHD8-206ENST00000553870 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
CHD8-206ENST00000553870 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
CHD8-206ENST00000553870 KRTAP2-1Q9BYU5 128 aa3.41□□□□□ -1.86
CHD8-206ENST00000553870 MT1GP13640 62 aa3.39□□□□□ -1.87
CHD8-206ENST00000553870 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
CHD8-206ENST00000553870 CDC42SE1Q9NRR8 79 aa3.35□□□□□ -1.87
CHD8-206ENST00000553870 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
CHD8-206ENST00000553870 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
CHD8-206ENST00000553870 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
CHD8-206ENST00000553870 MT1LQ93083 61 aa3.33□□□□□ -1.88
CHD8-206ENST00000553870 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
CHD8-206ENST00000553870 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
CHD8-206ENST00000553870 ROMO1P60602 79 aa3.28□□□□□ -1.88
CHD8-206ENST00000553870 MT1MQ8N339 61 aa3.28□□□□□ -1.88
CHD8-206ENST00000553870 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
CHD8-206ENST00000553870 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
CHD8-206ENST00000553870 KRTAP15-1Q3LI76 137 aa3.16□□□□□ -1.9
CHD8-206ENST00000553870 H3BS24 57 aa3.15□□□□□ -1.91
CHD8-206ENST00000553870 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
CHD8-206ENST00000553870 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
CHD8-206ENST00000553870 BRK1Q8WUW1 75 aa3.1□□□□□ -1.91
CHD8-206ENST00000553870 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
CHD8-206ENST00000553870 MT4P47944 62 aa3□□□□□ -1.93
CHD8-206ENST00000553870 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
CHD8-206ENST00000553870 PMAIP1Q13794 54 aa2.96□□□□□ -1.94
CHD8-206ENST00000553870 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
CHD8-206ENST00000553870 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
CHD8-206ENST00000553870 SPRR5A0A1B0GTR4 108 aa2.92□□□□□ -1.94
CHD8-206ENST00000553870 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
CHD8-206ENST00000553870 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
CHD8-206ENST00000553870 SYNE1Q8NF91 8797 aaKnown RBP2.85□□□□□ -1.95
CHD8-206ENST00000553870 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
CHD8-206ENST00000553870 MT1AP04731 61 aa2.85□□□□□ -1.95
CHD8-206ENST00000553870 PRO0628Q9UI54 55 aa2.85□□□□□ -1.95
CHD8-206ENST00000553870 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.95
CHD8-206ENST00000553870 KRTAP6-1Q3LI64 71 aa2.79□□□□□ -1.96
CHD8-206ENST00000553870 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
CHD8-206ENST00000553870 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
CHD8-206ENST00000553870 PRAC1Q96KF2 57 aa2.75□□□□□ -1.97
CHD8-206ENST00000553870 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
CHD8-206ENST00000553870 KTN1-AS1Q86SY8 53 aa2.68□□□□□ -1.98
CHD8-206ENST00000553870 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.99
CHD8-206ENST00000553870 MT3P25713 68 aa2.62□□□□□ -1.99
CHD8-206ENST00000553870 SVIPQ8NHG7 77 aa2.55□□□□□ -2
CHD8-206ENST00000553870 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
CHD8-206ENST00000553870 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
CHD8-206ENST00000553870 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
CHD8-206ENST00000553870 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
CHD8-206ENST00000553870 LUZP6Q538Z0 58 aa2.39□□□□□ -2.03
CHD8-206ENST00000553870 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
CHD8-206ENST00000553870 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
CHD8-206ENST00000553870 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
CHD8-206ENST00000553870 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
CHD8-206ENST00000553870 A0A0A0MQY5 61 aa2.13□□□□□ -2.07
CHD8-206ENST00000553870 NDUFAF8A1L188 74 aa1.98□□□□□ -2.09
CHD8-206ENST00000553870 LCE1FQ5T754 118 aa1.93□□□□□ -2.1
CHD8-206ENST00000553870 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
CHD8-206ENST00000553870 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
CHD8-206ENST00000553870 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
CHD8-206ENST00000553870 INE1O15225 51 aa1.68□□□□□ -2.14
CHD8-206ENST00000553870 PRM1P04553 51 aa1.65□□□□□ -2.15
CHD8-206ENST00000553870 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
CHD8-206ENST00000553870 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 142.5 ms