RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 USH2AO75445 5202 aa2.68□□□□□ -1.98
LINC-ROR-201ENST00000553704 KMT2DO14686 5537 aa2.64□□□□□ -1.99
LINC-ROR-201ENST00000553704 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
LINC-ROR-201ENST00000553704 INE1O15225 51 aa2.6□□□□□ -1.99
LINC-ROR-201ENST00000553704 KRTAP19-5Q3LI72 72 aa2.6□□□□□ -1.99
LINC-ROR-201ENST00000553704 LCE3CQ5T5A8 94 aa2.53□□□□□ -2.01
LINC-ROR-201ENST00000553704 LCE5AQ5TCM9 118 aa2.51□□□□□ -2.01
LINC-ROR-201ENST00000553704 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
LINC-ROR-201ENST00000553704 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
LINC-ROR-201ENST00000553704 KRTAP19-7Q3SYF9 63 aa2.49□□□□□ -2.01
LINC-ROR-201ENST00000553704 SSPOA2VEC9 5147 aa2.47□□□□□ -2.01
LINC-ROR-201ENST00000553704 KRTAP19-4Q3LI73 84 aa2.42□□□□□ -2.02
LINC-ROR-201ENST00000553704 MT1EP04732 61 aa2.4□□□□□ -2.03
LINC-ROR-201ENST00000553704 MT1LQ93083 61 aa2.4□□□□□ -2.03
LINC-ROR-201ENST00000553704 FSIP2Q5CZC0 6907 aa2.37□□□□□ -2.03
LINC-ROR-201ENST00000553704 KRTAP2-3P0C7H8 128 aa2.37□□□□□ -2.03
LINC-ROR-201ENST00000553704 KRTAP2-4Q9BYR9 128 aa2.37□□□□□ -2.03
LINC-ROR-201ENST00000553704 KRTAP2-1Q9BYU5 128 aa2.37□□□□□ -2.03
LINC-ROR-201ENST00000553704 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
LINC-ROR-201ENST00000553704 FCGBPQ9Y6R7 5405 aaPredicted RBP2.35□□□□□ -2.03
LINC-ROR-201ENST00000553704 KRTAP2-2Q9BYT5 123 aa2.35□□□□□ -2.03
LINC-ROR-201ENST00000553704 KRTAP19-6Q3LI70 58 aa2.32□□□□□ -2.04
LINC-ROR-201ENST00000553704 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
LINC-ROR-201ENST00000553704 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
LINC-ROR-201ENST00000553704 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
LINC-ROR-201ENST00000553704 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
LINC-ROR-201ENST00000553704 KRTAP9-7A8MTY7 169 aa2.27□□□□□ -2.05
LINC-ROR-201ENST00000553704 MT1GP13640 62 aa2.26□□□□□ -2.05
LINC-ROR-201ENST00000553704 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
LINC-ROR-201ENST00000553704 MT1MQ8N339 61 aa2.24□□□□□ -2.05
LINC-ROR-201ENST00000553704 CRCT1Q9UGL9 99 aa2.23□□□□□ -2.05
LINC-ROR-201ENST00000553704 KRTAP19-3Q7Z4W3 81 aa2.22□□□□□ -2.05
LINC-ROR-201ENST00000553704 DSTQ03001 7570 aaKnown RBP2.21□□□□□ -2.06
LINC-ROR-201ENST00000553704 LCE1EQ5T753 118 aa2.18□□□□□ -2.06
LINC-ROR-201ENST00000553704 MACF1Q9UPN3 7388 aaKnown RBP2.15□□□□□ -2.06
LINC-ROR-201ENST00000553704 SPRR2FQ96RM1 72 aa2.15□□□□□ -2.07
LINC-ROR-201ENST00000553704 LCE1AQ5T7P2 110 aa2.13□□□□□ -2.07
LINC-ROR-201ENST00000553704 KRTAP12-4P60329 112 aa2.09□□□□□ -2.08
LINC-ROR-201ENST00000553704 MDN1Q9NU22 5596 aa2.09□□□□□ -2.08
LINC-ROR-201ENST00000553704 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
LINC-ROR-201ENST00000553704 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
LINC-ROR-201ENST00000553704 SYNE2Q8WXH0 6885 aaKnown RBP2.07□□□□□ -2.08
LINC-ROR-201ENST00000553704 KRTAP5-1Q6L8H4 278 aa2.06□□□□□ -2.08
LINC-ROR-201ENST00000553704 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
LINC-ROR-201ENST00000553704 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
LINC-ROR-201ENST00000553704 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
LINC-ROR-201ENST00000553704 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
LINC-ROR-201ENST00000553704 MT1AP04731 61 aa2□□□□□ -2.09
LINC-ROR-201ENST00000553704 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
LINC-ROR-201ENST00000553704 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
LINC-ROR-201ENST00000553704 SPRR2EP22531 72 aa1.94□□□□□ -2.1
LINC-ROR-201ENST00000553704 SPRR2BP35325 72 aa1.94□□□□□ -2.1
LINC-ROR-201ENST00000553704 SPRR2AP35326 72 aa1.94□□□□□ -2.1
LINC-ROR-201ENST00000553704 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
LINC-ROR-201ENST00000553704 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
LINC-ROR-201ENST00000553704 MT3P25713 68 aa1.93□□□□□ -2.1
LINC-ROR-201ENST00000553704 PRM1P04553 51 aa1.87□□□□□ -2.11
LINC-ROR-201ENST00000553704 SPRR2DP22532 72 aa1.85□□□□□ -2.11
LINC-ROR-201ENST00000553704 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.11
LINC-ROR-201ENST00000553704 NEBP20929 6669 aa1.84□□□□□ -2.12
LINC-ROR-201ENST00000553704 KRTAP6-2Q3LI66 62 aa1.83□□□□□ -2.12
LINC-ROR-201ENST00000553704 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
LINC-ROR-201ENST00000553704 KRTAP20-1Q3LI63 56 aa1.77□□□□□ -2.13
LINC-ROR-201ENST00000553704 MT4P47944 62 aa1.66□□□□□ -2.14
LINC-ROR-201ENST00000553704 KRTAP20-2Q3LI61 65 aa1.62□□□□□ -2.15
LINC-ROR-201ENST00000553704 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
LINC-ROR-201ENST00000553704 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
LINC-ROR-201ENST00000553704 LCE1BQ5T7P3 118 aa1.46□□□□□ -2.18
LINC-ROR-201ENST00000553704 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
LINC-ROR-201ENST00000553704 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
LINC-ROR-201ENST00000553704 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
LINC-ROR-201ENST00000553704 LCE1CQ5T751 118 aa1.38□□□□□ -2.19
LINC-ROR-201ENST00000553704 KRTAP5-7Q6L8G8 165 aa1.35□□□□□ -2.19
LINC-ROR-201ENST00000553704 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
LINC-ROR-201ENST00000553704 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
LINC-ROR-201ENST00000553704 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
LINC-ROR-201ENST00000553704 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 157.3 ms