RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
NRDE2-202ENST00000553409 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
NRDE2-202ENST00000553409 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
NRDE2-202ENST00000553409 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
NRDE2-202ENST00000553409 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
NRDE2-202ENST00000553409 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
NRDE2-202ENST00000553409 MT1GP13640 62 aa3.62□□□□□ -1.83
NRDE2-202ENST00000553409 CRCT1Q9UGL9 99 aa3.62□□□□□ -1.83
NRDE2-202ENST00000553409 FCGBPQ9Y6R7 5405 aaPredicted RBP3.59□□□□□ -1.83
NRDE2-202ENST00000553409 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
NRDE2-202ENST00000553409 KRTAP9-2Q9BYQ4 174 aa3.55□□□□□ -1.84
NRDE2-202ENST00000553409 MUC12Q9UKN1 5478 aa3.53□□□□□ -1.84
NRDE2-202ENST00000553409 KRTAP19-6Q3LI70 58 aa3.5□□□□□ -1.85
NRDE2-202ENST00000553409 MT1MQ8N339 61 aa3.5□□□□□ -1.85
NRDE2-202ENST00000553409 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
NRDE2-202ENST00000553409 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
NRDE2-202ENST00000553409 LCE3BQ5TA77 95 aa3.42□□□□□ -1.86
NRDE2-202ENST00000553409 KRTAP9-6A0A140TA67 174 aa3.42□□□□□ -1.86
NRDE2-202ENST00000553409 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.88
NRDE2-202ENST00000553409 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
NRDE2-202ENST00000553409 MT1AP04731 61 aa3.31□□□□□ -1.88
NRDE2-202ENST00000553409 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
NRDE2-202ENST00000553409 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
NRDE2-202ENST00000553409 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
NRDE2-202ENST00000553409 PRM1P04553 51 aa3.28□□□□□ -1.89
NRDE2-202ENST00000553409 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
NRDE2-202ENST00000553409 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
NRDE2-202ENST00000553409 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
NRDE2-202ENST00000553409 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
NRDE2-202ENST00000553409 SPRR2FQ96RM1 72 aa3.21□□□□□ -1.9
NRDE2-202ENST00000553409 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
NRDE2-202ENST00000553409 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.16□□□□□ -1.9
NRDE2-202ENST00000553409 MACF1Q9UPN3 7388 aaKnown RBP3.15□□□□□ -1.91
NRDE2-202ENST00000553409 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
NRDE2-202ENST00000553409 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
NRDE2-202ENST00000553409 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
NRDE2-202ENST00000553409 MDN1Q9NU22 5596 aa3.07□□□□□ -1.92
NRDE2-202ENST00000553409 LCE1DQ5T752 114 aa3.03□□□□□ -1.92
NRDE2-202ENST00000553409 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
NRDE2-202ENST00000553409 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
NRDE2-202ENST00000553409 SPRR2EP22531 72 aa2.92□□□□□ -1.94
NRDE2-202ENST00000553409 SPRR2BP35325 72 aa2.92□□□□□ -1.94
NRDE2-202ENST00000553409 SPRR2AP35326 72 aa2.92□□□□□ -1.94
NRDE2-202ENST00000553409 MT3P25713 68 aa2.83□□□□□ -1.96
NRDE2-202ENST00000553409 NEBP20929 6669 aa2.83□□□□□ -1.96
NRDE2-202ENST00000553409 SPRR2DP22532 72 aa2.8□□□□□ -1.96
NRDE2-202ENST00000553409 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
NRDE2-202ENST00000553409 LCE4AQ5TA78 99 aa2.65□□□□□ -1.99
NRDE2-202ENST00000553409 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
NRDE2-202ENST00000553409 KRTAP9-9Q9BYP9 154 aa2.56□□□□□ -2
NRDE2-202ENST00000553409 MT4P47944 62 aa2.52□□□□□ -2.01
NRDE2-202ENST00000553409 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
NRDE2-202ENST00000553409 KRTAP4-6Q9BYQ5 205 aa2.49□□□□□ -2.01
NRDE2-202ENST00000553409 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
NRDE2-202ENST00000553409 KRTAP4-11Q9BYQ6 195 aa2.46□□□□□ -2.01
NRDE2-202ENST00000553409 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
NRDE2-202ENST00000553409 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
NRDE2-202ENST00000553409 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
NRDE2-202ENST00000553409 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
NRDE2-202ENST00000553409 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
NRDE2-202ENST00000553409 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.04
NRDE2-202ENST00000553409 KRTAP5-3Q6L8H2 238 aa2.3□□□□□ -2.04
NRDE2-202ENST00000553409 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
NRDE2-202ENST00000553409 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
NRDE2-202ENST00000553409 KRTAP4-2Q9BYR5 136 aa2.14□□□□□ -2.07
NRDE2-202ENST00000553409 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
NRDE2-202ENST00000553409 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
NRDE2-202ENST00000553409 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
NRDE2-202ENST00000553409 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
NRDE2-202ENST00000553409 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
NRDE2-202ENST00000553409 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
NRDE2-202ENST00000553409 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
NRDE2-202ENST00000553409 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
NRDE2-202ENST00000553409 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
NRDE2-202ENST00000553409 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
NRDE2-202ENST00000553409 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
NRDE2-202ENST00000553409 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
NRDE2-202ENST00000553409 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms